Strain | Pseudomonas balearica DSM 6083, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GAACCCAAGGTATTCGGTGATGAGCGCGGCTTCTTTTACGAAAGCTTCAACGCCGCCGCCTTCGAGGCGGCGACCGGGCTCAAGCGCCAGTTCGTCCAGG ACAACCACTCCAAGTCGCGGCGCGGCGTGCTCCGCGGCCTGCACTACCAGATCCGGCAGCCGCAGGGAAAACTGGTTCGCGTGGTGCAGGGCGAGGTGTT CGACGTGGCGGTGGACCTGCGCCGGAGCTCGCCGAGCTTCGGCCGCTGGGCCGGCACCCACCTGAGCGCGGAGAACAAGCGCCAGCTGTGGATACCCGAG GGCTTCGCCCACGGCTTCGTGGTGCTCAGCGAGACCGCCGAGTTCCTCTACAAGACCACCGACTACTACGCCCCCGAGCACGAGCGCAGCCTGCTGTGGA ACGACCCGGAGCTGGGCATCGAGTGGCCGTTCGACGAGCCGCCGCAGCTGTCGGCCAAGGACATCGCCGGCAAGCCTCTGAGCCAGGCGGAGCTGTTTCC
|
|
DNA Sequence for Gene |
>CL52_RS19865
ATGAAGATCCTCATCACCGGCAGCAAGGGACAGCTCGCCCGCGAACTGCAGACCGAGCTGGCCGGTGAAGGAAAGGTGCTCGCCCTCGGGCACCAGGCGC TCGATCTGGCCGAGGCCGAGCAGATTCGCCAGCAGGTGCGCCTGCTGCGCCCGGACCTGATCATCAACGCCGCCGCCTACACGGCGGTGGACCCGGCCGA GCACGAGCGCGACAAGGCGTTCGCGGTGAATGCCGTGGCCCCGGGGATACTCGCCGAAGAGACCGCGCGGCTCGGCATCCCGCTGATCCACTATTCCACC GATTACGTCTTCGACGGCCGCAAGGCGGCCCCCTTCACCGAAGCCGACACGCCCAATCCGCTCGGCGTCTATGGCGCCAGCAAGCTGGCCGGCGAGCGCG CCGTACAGGCCGTCGACGGACAGCACATGATCCTGCGGACCAGCTGGGTCTACGGCCTGCACGGGCGCAACTTCCTGCTGACGATGATGCGCCTGCTGCA GGAGCGAGACACGGTGTCGGTGGTCAGCGACGAAATCGGCGCTCCCACTTGGGCACGCAGCATCGCTGCGGCGACCGGCGAACTGGTGCGCCGCTGGCGC GCTGGCGAGGGCGAGCTGACCGGGCTGTTCCACATGACCGCGCGCGGCGAGACCTCCTGGTACGGCTTTGCCTGCGCCATCGCCGAGCACCTGCACCAGC AGGGCCGGCTACGGGCAACGGTGACCCCGATCCTCTCGCGTGACTACCCCACCGCTGCGCAGCGGCCGCTCAATTCCCGGCTCGATTGCAGCCTGCTGCA GAGCCGCTGGGGCATTGCCCTGCCGGACTGGCAGGTCGCCCTGCAGCAATGCATGACCCAACCGCGCAACAGCGAGGCCAGCCAGCCGGCGCCACAGCCA CAGATCGTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCGCCTTGCCCTGACGCGCCGACGCGCTGAATCCGACGCCCGCAACGGTGCATAATGCCGCCGTTCTCCAGGCGTCCCGCATGACTTCGACTTCCTCACC TCGCCGCCCACGCTGGCGCAACCTCCTGCTCCTGGCATTGCTGCTCACGCCGTTGCTCTGGCCGCTGCAGCAGCTGGCCGAGCGCTATTACCGCAACGAG CTGACCGAACAGAACCGGCAGACCCTCGACCTCTACGTCGCCAACCTGCTCGGCACGCTGAACCGCTACGAAGTGCTGCCGCGCATTCTCGGTGACCTGC CCGAGCTGCGTTCGGCGCTGCAGAATACCGAGGTACCGGCGGTGCAGGACCAGGCCAACCGCCTGCTCAAGCAGTTGCAACGGCGCACCGGCGCCGACGT CATCTATCTGATGAATACCCGCGGCATGACCCTGGCGGCCTCCAACTGGGATGCCGAGGACAGCTTCGTCGGCCGCAACTTCGCCTTTCGCCCGTACTTC
|
|
Amino Acid Sequence |
>dTDP-4-dehydrorhamnose reductase
MKILITGSKGQLARELQTELAGEGKVLALGHQALDLAEAEQIRQQVRLLRPDLIINAAAYTAVDPAEHERDKAFAVNAVAPGILAEETARLGIPLIHYST DYVFDGRKAAPFTEADTPNPLGVYGASKLAGERAVQAVDGQHMILRTSWVYGLHGRNFLLTMMRLLQERDTVSVVSDEIGAPTWARSIAAATGELVRRWR AGEGELTGLFHMTARGETSWYGFACAIAEHLHQQGRLRATVTPILSRDYPTAAQRPLNSRLDCSLLQSRWGIALPDWQVALQQCMTQPRNSEASQPAPQP QIV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|