Pseudomonas balearica DSM6083 (=SP1402), CL52_RS15615

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006099 tricarboxylic acid cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06039
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008924 malate dehydrogenase (quinone) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06039
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pbm01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm00020 Citrate cycle (TCA cycle) 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm00620 Pyruvate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pbm01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. IPR006231 Malate:quinone-oxidoreductase 5 494 50.661888
NCBIfam TIGR01320 JCVI: malate dehydrogenase (quinone) IPR006231 Malate:quinone-oxidoreductase 9 491 0.0
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 10 264 2.4E-8
Pfam PF06039 Malate:quinone oxidoreductase (Mqo) IPR006231 Malate:quinone-oxidoreductase 8 494 0.0
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 9 280 1.46E-22
PANTHER PTHR43104 L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL - - 5 443 7.6E-26
Gene3D G3DSA:3.30.9.10 - - - 114 285 2.4E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.