Pseudomonas balearica DSM6083 (=SP1402), CL52_RS14935
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas balearica DSM 6083, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTTCGAAGAAGCCGACGCCGACTATCGCGCAGGCTGATCCGCCGCCGCGCAACAGAAAGCCCCGCTTGGCGGGGCTTTTTTCGTTTCGTCAGTCGTCGG CGATCAGGTTGGAGCGATCATCGGTCGCGCCGGCGGCGATCAGGTGTTCGGCCTCGTCCTCGGGCACATGCACCCGATGCCCGTCCAAGTGCAGTTCGGA CATCCGCGCCTGCGGATCGGTGGTGATGCGCGCATCCATGATCGCCCCGCGGTGCGGCTGGCCATCCACCGTGATGACGCAAGTGCCGCTCGTGGTATCG ATTTCGATTGCCATGGCCATGCCTCCTCTGGGTTCTCGACGGTTCTGCAATTCAGACCTGCCGAGCGGGCAATGCGATCCATCCAGGGGAAAAAAGCCTT AAACGTTACGATATAACATGTTAGATTTCCGGCCCTCTTGCCGACCGCCCACTTCGTTGCGCTGGTCGCCTCGCAGTTTTCGAAACGACAGGAGAGTCGC
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| DNA Sequence for Gene |
>CL52_RS14935
ATGCATCCGAAAAAGAACCCGCTTGCACTGGCCCTCGGGCTGGTCGCATTTCCGTGCGCACAGGCTAGCGAGCCGGTCGAGCTGCCGCCGGTGGTCGTCA GCGCGAGCGCTTTGGGCAGTGCCCGCGAGGCAATGACCACCGCTGCTCAGGTGGTCGAGGGCGATGAACTGGTGCTGCGGCGCGAGGCGACATTGGGCGA GACGCTCGATCATCTGCCGGGCGTGCGCTCCAGCAGCTTCGGCGCCGGCGCGGCGCGACCAGTGATCCGCGGGCTGGATGGCGCACGGGTCAAGGTGCTG AGCGATGGCGTCGAGCTGCTCGACGCTTCCACCATCAGCCCCGACCACGCGGTGACCAGCGAGCCGCTACTGGCCGAGCGCATCGAGGTGCTCAAGGGCC CGGCGACGCTGCTCTACGGTGGCGGCGCCATCGGCGGGGTAGTCAACGTGATCGACAAGAAGATCCCCATCCACGTGCCGGAGAAGGGCTACGAAGGCGA GCTGGAACTGCGCACCAACAGCGTCGCCAACGAAGGTGCCGGGCTGTTCGGCATCACTGCCGGCAGCGGCCACTTCGCCGTCCGCGCCGAGGGCACCAAG CGCCAGGCCGACCCTTATGAAATCCCCGGTTCGCCAGACAAGCAGGAAGGCTCCTACAACGACACCGACAGCTTCAATCTGGGCGCCAGCTTCATCGGCG AGCGCGGCTACATCGGCGCCGCCTACGGTGAGCAGAACAACCGCTACGGACTGTTGGCCCACGAGCACGCCGATTGCCACACCCACGGCAGCGACTGGCA CTGCGGTGGCCATGATGATCACGACGATGACGACGACCATGATCATGACGAACATGGCAGCGTGCCTTATGTCGACATGCGCCAGAAGCGCTGGGATCTG CGTGGCGAGCTGAGCGATCCGTTGCCGGGCTTCGAACTGGCGCGGCTGCGTGTCGGCCACAGCGACTATCAGCACAAGGAGATCGAAGGTGGCGAAGTGG GCACCCGCTTCAACAACGATGCCACCGATGCGCGCCTGGAGCTGACCCATCAGCCGCTGTTCGGCTGGCGCGGTGTGCTCGGCGCGCAGACCCTGCGGCG CGACTTCGAAGCTCTCGGCGAAGAGGCCTACGTGCCGCAGACCCTGACCCGCAACCACGGATTGTTCCTGCTCGAGGAATACACCGCCGGCGCCTGGCGC TACGAGCTCGGCCTGCGCCACGAATGGCAGGACATCGATGCCGATGGCCGCCCGGATACCGATCACAGCGGCACCTCGATGTCCGCCGGTGCGGTCTGGA CCTTTGCTCCGCAGTATTCGCTGGGCTTTGCGCTGTCGCGCTCGCAACGCCTGCCGACGGCCGAAGAGCTATACGCCAACGGTCCTCACGCGGCGACCCG TACCGTCGAACTGGGCAACGTCGAGCTGAAGGAAGAAACCTCGCACAATGCCGAGCTCACCCTGCGCAAGTTCGCCGGCCGCACGACCTTCAGCCTGAGC CTGTTCCGCAACGAGGTGAACGACTTCATCTACGCCGCCGACACCGGCAACGATATCGGCGGCGGCTACCGCGAGATCGCGTATCGCCAGCAGGACGCCG TGCTCACCGGTGCGGAAGGGGAGGTGCGCTTCCAGGCCAGCGACGCCACTGCGTTCACCCTGTTCGGCGACCACGTGCGCGGCGAGTTGCGCAAGGGAGG AGATGATCTGCCGAGGATGCCAGCCGATCGACTCGGTGTGCGGCTCGACCAACGCCTCACGCCTGCGCTCGATGGCCTGCTCGAGCTCTACCGCGTTCAG CGTCAGGACCGCTTGGCCGACCATGAGACCGAAACCGGTGGCTACAACATGCTGGGCGCCGGCCTTGGCTACCACGGCTCGTTCAACGAGGCGGATTTTC TGCTGTATCTCAAAGGCAGCAACCTGCTCGACGAGAAGGCTCGCCAGCACACTTCCTTCATCAAGGATGAGGTGTTGCTACCCGGGCGCAACCTGACGGT CGGCGTACGGCTGGAGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGATCGGGCCAGGCCAGGGTCGAATGCTGGCCTTGGCCTCCCGGCGCTCCAGCGGCGAATCCTTCAGTCGAGCACCTCCGACAGATCGATTCGCCGCC AGCAGGCTTCGGCGACGCTGTACAGCGCGAAGGCGAACAACCCCGCTGCAATTGCCAACAGCAGACTTTCCCCGGCGGGCAACTGCTGTAGCGTTTCGAG GGCTTGCTTGACCCCGGGCGGATCGGTCGGGCTGTATCGGCTGCCGCCGGTCAGCAGCAACGCGGCAATGATCAGCAGCACGCAGCCGCGTGCCGCCAGG CCGATGCGCGATATTGGCCGCACCACGCGCATGGTCTGCTCGTCGCACTGAAAGTAACGCTCGAACTTCGCCCGCCAGGCCTTGACCAGATGAGCAATGC CGGCTCCGAGCGGTATCAGCGCTGCCAGGTACACCAGCCAGCGCGCATGCTGCAGGCCGAGAAAGCGCTGCAGCGCATCGGCCTCAGCGCTTCCCCCCGA
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| Amino Acid Sequence |
>TonB-dependent receptor
MHPKKNPLALALGLVAFPCAQASEPVELPPVVVSASALGSAREAMTTAAQVVEGDELVLRREATLGETLDHLPGVRSSSFGAGAARPVIRGLDGARVKVL SDGVELLDASTISPDHAVTSEPLLAERIEVLKGPATLLYGGGAIGGVVNVIDKKIPIHVPEKGYEGELELRTNSVANEGAGLFGITAGSGHFAVRAEGTK RQADPYEIPGSPDKQEGSYNDTDSFNLGASFIGERGYIGAAYGEQNNRYGLLAHEHADCHTHGSDWHCGGHDDHDDDDDHDHDEHGSVPYVDMRQKRWDL RGELSDPLPGFELARLRVGHSDYQHKEIEGGEVGTRFNNDATDARLELTHQPLFGWRGVLGAQTLRRDFEALGEEAYVPQTLTRNHGLFLLEEYTAGAWR YELGLRHEWQDIDADGRPDTDHSGTSMSAGAVWTFAPQYSLGFALSRSQRLPTAEELYANGPHAATRTVELGNVELKEETSHNAELTLRKFAGRTTFSLS LFRNEVNDFIYAADTGNDIGGGYREIAYRQQDAVLTGAEGEVRFQASDATAFTLFGDHVRGELRKGGDDLPRMPADRLGVRLDQRLTPALDGLLELYRVQ RQDRLADHETETGGYNMLGAGLGYHGSFNEADFLLYLKGSNLLDEKARQHTSFIKDEVLLPGRNLTVGVRLEF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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