Pseudomonas balearica DSM6083 (=SP1402), CL52_RS13215
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas balearica DSM 6083, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCACGCTGCTCCGCGCGCAGACGACCTTCGTCTGCATCGAGTTATCCAGTGGAAAGCCGAAGCGCATGCCCCCCGAGTTCGTCGAGGGGTACGGCAAG GCGCTGGTCGAGCCCTATCCCCTCGAGCTGTGAGGGCTGTCAGCCGCCCTGTTCGGGTCTGCGAACGTCGGACTCGCGGCGCTCTTCGGCGTCCTCGCGC CACTGCTCCTGGACTTCTTGCTTCATCTTCGGATCGGCTTGATGCTTGCCATCGTAATGCGTGTCGTCGCCCATCTGCTGCTGGGTGTTGTCGTGAACGT TCTGCGGGTCTTTCGCATGCGGCTGCATATGGTCGTCGGCGGCCGCGTTGACGGCGATGCCGCCCGCGAGCAGGGTGCCGAACAGAAGTGACGTCAGCTG CGTTGGTTTCATGCCAGCCTCCACATATGTCGAAAAGAATCGGAACTGCGCCTAGTAACGACCCCCGGTCGAGCATCATCGTTCACCTGGTGAGGCGGCC
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| DNA Sequence for Gene |
>CL52_RS13215
ATGAGCGCACACCAGCGCAAGATCATCCACGTCGATTGCGACTGCTTTTTCGCCGCCATCGAGATGCGCGACGACCCGACGCTGGCACAGCGGCCGATCG CCGTCGGTGGCGCGGCGGATCGGCGTGGCGTGATCGCGACCTGCAATTACGAGGCGCGGGCCTTTGGCGTGCGCTCGGCGATGGCGTCGGCCCATGCGCT GCGGCTGTGTCCCGACTTGCTGATTCTGCGGCCGCGCATGGATGTCTACCGCGAAGCCTCGCAGGAGATTCACGGCATCCTGCGCAGCTACACCGATCTC ATCGAGCCGCTATCGCTGGACGAGGCCTACCTCGATGTCTCCGCGTGCACGCAGTTCAACGGCAGCGCCACGCGTATCGCCCAGGACATCCGTCGGCGCG TCTGGCAGCAGTTGCGCATCACGGTGTCGGCCGGGGTCGCGCCGAACAAGTTTCTCGCCAAGATCGCCAGCGACTGGAACAAGCCGGACGGCCTGTTCGT CATCACTCCCGCCGAGGTTGGGGCCTTCGTCGCCAGCCTGCCGGTCAAGCGCCTGCATGGTGTCGGGCGGGTCACGGCGGAAAAGCTCGATCGCCTGGGT ATTCGGACCTGTGCCGACCTTGGGCAATGGAGTCGGCTGGCGCTCGTGCGCGAATTCGGCGCTTTCGGTGAGCGCCTCTGGGGGCTGGCACAGGGTATCG ACGAGCGCCCGGTTCAGGTCGAGCGCAGGCGCCAATCGGTCAGCGTCGAGCAGACCTTCGACCGCGACCTGCCCGACCTGGCCGCTTGCGAAGCGCAACT CGCCGAATTGTTGGCGCAGCTCGAGCGGCGGATCGCCCGGCTGGAGGCGGACTACCGGCCGGGCAAGCCATTCGTGAAGCTGAAATTCCACGATTTTACC CAGACGACCGTCGAGCAGGTTGGCGTCGGCGCGACGCTCGAAGGTTTCACCTCCCTGCTGGCGGGCGCCTACGCCCGCGGCGAACGGCCCGTGCGGCTGA TCGGCATAGGCGTGCGTCTGAGCAGCCGACGCGAGCAGGTCGAGCAACTGCGTCTGTTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCGACGAAGCGCACTCTCGGCACGCTTCGTGCTGCCGATAGCGAAAGAAGTGTGACGGTGCGCATATTTTGATGCGCGACATCGGCGCACAGGCAGAC GACGGTATTTGGACACCCTCAACCATTGTTGTTAAAGTCCCGTCGCCACTGATGGCAAATTGATATCGGTCATTGTTAGCCGTTCTTCAGCTGAACGCGC AGTGGCTTGTGGGCAAGGGGAGCCGGTGAGTGGGGCTGTTTTCGAGAAAGCGTGATAGCCGGGCGGCGGGGTTGCTCGGCCTTGAGAGCAGCCCGCACGG CATGAGCCTGGCGCAGGTTCTGCGCGAAGCAGGCGCGCCGGCGCAGTTGCGTCTGTGCCAGTACCACGCCGCCGACACTGCCGGCCAGGGTGAGCTGCTC AAGCGGCTGGTCGCTGAACACCGCCTCGAAGGCGCGGCAGTCAACGTGCTGCTGCATCCCTCCGAATACCAGATGTTCCTCCTGGAGGCGCCCGAGGTGC
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| Amino Acid Sequence |
>DNA polymerase IV
MSAHQRKIIHVDCDCFFAAIEMRDDPTLAQRPIAVGGAADRRGVIATCNYEARAFGVRSAMASAHALRLCPDLLILRPRMDVYREASQEIHGILRSYTDL IEPLSLDEAYLDVSACTQFNGSATRIAQDIRRRVWQQLRITVSAGVAPNKFLAKIASDWNKPDGLFVITPAEVGAFVASLPVKRLHGVGRVTAEKLDRLG IRTCADLGQWSRLALVREFGAFGERLWGLAQGIDERPVQVERRRQSVSVEQTFDRDLPDLAACEAQLAELLAQLERRIARLEADYRPGKPFVKLKFHDFT QTTVEQVGVGATLEGFTSLLAGAYARGERPVRLIGIGVRLSSRREQVEQLRLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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