Pseudomonas balearica DSM6083 (=SP1402), CL52_RS12650
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas balearica DSM 6083, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGTTGTAGGAAAAGCGCGTGCTTCCATCCGGCATCAGGCCCTTGCCTTGGGTCGCACGCACCGAGCTGCACAGGTTGGTCTTGCCCGACTTGCAGAATTT GCACTCTCGACATTCAGCCGTGTACAGCGGAATCACATGATCACCGACCTTCACCGAGGTCACGCCCTCGCCCACGGCCTCGACGATGCCACCTCCCTCG TGGCCGAGAATGCAGGGAAACACGCCTTCGCTGTCCTGGCCGGACAGGGTGTAGGCATCGGTATGGCAAACGCCGCTGGCGACGATACGCACCAGCACTT CACCCGCCTTGGGCGGCTCGACGTCCACCTCGACGATCTTCAGCGGCTCGTTAGGGGCAAAGGCGACGGCAGCACGGGACTTGATGGTCATGGCTCACTC TCGATGGGTTGCAGTCGGGTGAGTATAATTTCTCTTCAGGTAGGGATAATCTCGTTTTTTCTCAAAACATTAGTGCTGCAAAGCAATAATCGAGGGCCGC
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| DNA Sequence for Gene |
>CL52_RS12650
ATGAGCCGCTGGGAAGGTCTGGACGAGTTCGTTGCCGTTGCCGAACAGGGCAGCTTCATGGCCGCCGCGCAGAAGCTGCGCGTGTCGTCGTCGCATGTCA GCCGCCAGGTCGCACGCCTGGAGGAACGCCTGCAGACGCGCCTGCTATATCGCACCACCCGTCGCGTTTCACTGACCGATGCCGGTCATCACTTCTTCGC CCGTTGCCAGCGCCTGATCGAGGAACGCGACGATGCCTTCAGCGCCGTCAGCGATCAGAACAGCGTGCCCAGCGGCCTGCTGCGCATGACCGCTGCCGTC GCCTATGGAGAGCGGTTCATCGTGCCACTGGTGAACGACTTCATGGCGCGTCATCCGCAGCTGCGGGTGGAGATCGAGCTGTCCAATCGCACGCTCGACC TGGTCCAGGAAGGCTTCGATCTCGCGATCCGCCTAGGTCGGCTGGGCGAATCGCGGCTGGTCGCAACACGAATCGCACCTCGCGTCATGTATCTGTGTGC CGCACCGGCGTATCTGGAACGTTACGGCCGCCCGCACACGCTCTCCGAGCTGGCACGGCACAACTGCCTGATCGGCACCAGCGACACCTGGATGCTGCAG GTCGACGGCCGCGAGCAGCATTTCAAGCCTTCGGGCAACTGGCGCTGCAACAGTGGCCATGCCGTGCTCGATGCAGCGCTGCGCGGCTTCGGCATCTGCC AACTGCCTGATTACTACGTTCAGGAACCGCTACGCCGAGGCGAACTGGTTGCGCTGCTTTCGGCGCACCAGCCGCCGGACACCGCCGTCTGGGCCGTTTA TCCGCAGCGCCGGCTGCTGTCCGCGAAGGTCGGTGGCCTGATCGAGGCACTGAAAGCGGGACTGGCCGCCGCGCCGGAATACGCCCGTAGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCCGTTTCGCCTGTTCGGTCGTCTGTCCGGCGTCCGGACGGGCGTTGGAACCCTGCCCTGCTGGCCCCGTCGTAACTGGAAAGCCAGAGCGTCGGCGT CTGGTTTTTGCCAAGCCATGCCATCAGGAGAATTCCATGCTCATCCAGGTAAACAGCAATCACAGCATCGAAATGTCCCAGGGCCTGGAGGACCGCGTCC GCGCCACCCTGGAAGACGAGCTGGAGCGATTCGACGAATACCTGACGCGTCTGGAGGTTCACCTCAACGACGAGAACGGCAGCAAGAGCGGCCCGCAGGA CAAGCGCTGCCAGATCGAGGCCCGTCTCAAGCACCACGAACCGCTATCGGTAACGCACAAGGCCGAGTCGCTGGACCTGGCCATCGACGGCGCAGCGGAG AAGATGCTGCACGCGCTCGACCATCTCACCGGCAAGCTCAGCCGCTGACCTCACCCTTTCACCGGCCCCTGTTGCGAGGTACCCCATGCCAAGCGATCTG
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MSRWEGLDEFVAVAEQGSFMAAAQKLRVSSSHVSRQVARLEERLQTRLLYRTTRRVSLTDAGHHFFARCQRLIEERDDAFSAVSDQNSVPSGLLRMTAAV AYGERFIVPLVNDFMARHPQLRVEIELSNRTLDLVQEGFDLAIRLGRLGESRLVATRIAPRVMYLCAAPAYLERYGRPHTLSELARHNCLIGTSDTWMLQ VDGREQHFKPSGNWRCNSGHAVLDAALRGFGICQLPDYYVQEPLRRGELVALLSAHQPPDTAVWAVYPQRRLLSAKVGGLIEALKAGLAAAPEYARR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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