Pseudomonas balearica DSM6083 (=SP1402), CL52_RS12310
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas balearica DSM 6083, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGAAACGGTGCGCAAGCCCTGGAGCGCCGACGATCTGGCGCGCTTCACGCGGCTGGTGCAGGACGCCGTAGGCTTCGATGCCAGTCGCGGCGACAGCGTC AGCGTGATCAACACACCGTTCGTCCCGGATACCTTCGACGAGAGTGCGCTGGAGATACCCTTCTACTCGCAGCCGTGGTTCTGGGATGTGGTCAAGCAGG TGCTGGGCGTACTGTTCATCCTGGTGCTGGTGTTCGGTGTGCTGCGTCCGGTGCTGAAGAACCTGACCACGACCGCGCAGAGCAAGCAGCTGCAAGCGGC CGTGGGCGGCGCGGAGCTGGGTGAGGGCGATGACGTCGATTCGGCCCTGTCCAGCGACCGGGTCAGCCTGAGCGGCCCGCAGAACATCATGTTGCCAAGC CCGAGCGAGGGATACGAAGCCCAGCTCAACGCGATCAAGAACCTGGTAGCCGAAGACCCCGGACGGGTGGCGCAGGTGGTCAAAGAGTGGATCAACGCCG
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| DNA Sequence for Gene |
>CL52_RS12310
ATGAGTGACAATCGCATACCGACCAAGCTCAACAAGGTCGACAAGGCCGCCATTCTCCTGCTGTCGCTGGGGGAGACCGACGCCGCCCAGGTGCTGCGTC ACCTCGGGCCGAAGGAAGTGCAGCGCGTCGGCACCGCGATGGCGCAGATGCGCAATGTGCAGAAGGCGCAGATCGAGCAGGTGATGGGCGAGTTCGTCGA GATCGTCGGCGACCAGACCAGCCTTGGCGTGGGCTCGGACAGCTACATCCGCAAGATGCTCACCCAGGCGCTCGGCGAGGACAAGGCCGGCGGCCTGATC GATCGCATCCTGCTCGGTGGCAACACCAGCGGCCTGGACAGCCTGAAATGGATGGAGCCGCGCGCCGTGGCCGATGTGATCCGTTACGAGCACCCGCAGA TCCAGGCCATCGTCGTGGCCTACCTCGACCCGGACCAGGCCGGCGAAGTCCTGAGCCACTTCGATCACAAGGTCCGCCTGGACATCATCCTGCGCGTGTC CTCGCTCAATACCGTGCAGCCGGCCGCGCTCAAGGAACTGAACCTGATTCTCGAGAAGCAGTTCTCCGGCAATACCAGCACCAGCCGCGCCAGCCTGGGC GGCGTCAAGCGCGCCGCGGACATCATGAACTACCTCGACAGCTCCATCGAAGGCCAGCTGATGGACTCGATCCGCGAGGTGGACGAGGACCTGTCCGGGC AGATCGAGGATCTGATGTTCGTCTTCGACAACCTGGCCGACATCGACGACCGTGGCATCCAGGTGCTGCTGCGCGAGGTGTCCTCGGACGTGCTGGTCAT GGCCCTCAAGGGGGCCGACGAGGCGATCAAGGAAAAGATCTTCAAGAATATGTCCAAGCGCGCCGGCGAGCTGCTGCGCGACGACCTGGAGGCCAAGGGG CCGGTCCGCGTCAGCGACGTGGAGAACGCACAGAAGGAAATCCTCACCATTGCCCGCCGCATGGCCGAAGCCGGGGAAATCGTCCTGGGCGGCAAGGGCG GCGAAGAGATGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGCCGATGGCTAAAGACAATCCGAGCGAGCTGATCCGCGCGCGCGACGTCAGCGTCTTCGATCGCTGGGCGCTGCCGAGCTTCGATCCGGAACGCGAG CCCGACGAACAGCCGAGCGAGGCTCCGGAGCCGCCGCCCGAAGAGACCGCTCACAGCGAAGAGGTCCCGGTCGAGGAAGTCAAACCGCTGACGCTCGATG AACTCGAGACCATCCGCCAGGAGGCCTACAACGAAGGGTTCAGCACGGGCGAGCGGGACGGCTTTCATGCCGGACAGCTCAAGGCCCGGCAGGAGGCCGA GGCGACCCTGGCCAGTCGCCTGGAAAGCCTGGAAAAACTCATGGCGCAGCTGCTCGAGCCGATCGCCGAGCAGGATCGCAACCTCGAGCATTCGCTGGTC ACGCTCGTCAGTCATATGGCGCGCGAAGTGATCCAGCGCGACCTGCTGATCGACTCCAGTCAGATCCGCCAGGTCCTGCGCGAGGCGCTCAAGCTGCTGC
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| Amino Acid Sequence |
>flagellar motor switch protein FliG
MSDNRIPTKLNKVDKAAILLLSLGETDAAQVLRHLGPKEVQRVGTAMAQMRNVQKAQIEQVMGEFVEIVGDQTSLGVGSDSYIRKMLTQALGEDKAGGLI DRILLGGNTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAGEVLSHFDHKVRLDIILRVSSLNTVQPAALKELNLILEKQFSGNTSTSRASLG GVKRAADIMNYLDSSIEGQLMDSIREVDEDLSGQIEDLMFVFDNLADIDDRGIQVLLREVSSDVLVMALKGADEAIKEKIFKNMSKRAGELLRDDLEAKG PVRVSDVENAQKEILTIARRMAEAGEIVLGGKGGEEMI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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