Pseudomonas balearica DSM6083 (=SP1402), CL52_RS12240
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas balearica DSM 6083, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGTCACCTCGGAGCTGAAGACCGCCTTTCAGATCGGCTTCATGATCTTCATTCCCTTCCTGATCATCGACATGGTCGTCGCCAGCGTGCTGATGGCGAT GGGCATGATGATGCTGTCGCCGCTGATCATTTCGCTGCCGTTCAAGATCATGTTGTTCGTCTTGGTCGATGGCTGGGGGCTGATTATCGGCACCCTGGCC GGCAGCTTCGGCACCCTGTAGGAGCCCTCCGATGACCCCAGAAGTCGCAGTGGACATATTTCGTGAAGGCCTCTGGATGACCGCCGTGATCGTGGGCGTG CTGGTGGTGCCGAGCCTTGTGGTCGGGCTGGTGGTGGCGATGTTTCAGGCTGCCACGCAGATCAACGAGCAGACCCTGAGCTTCCTGCCGAGGTTGTTGG TGATGTTGCTGACGCTGATCTGGGCCGGGCCCTGGCTGGTGCGTGAGCTGATGGAGTACACGCAGAATCTGATCACCAACATCCCGCTGATCATCGGCTG
|
|
| DNA Sequence for Gene |
>CL52_RS12240
ATGCTCGAACTGTCCGACGCGCAGATCGGCGCCTGGGTGGCGCAGTTCATGCTGCCGCTCTTTCGCGTCGGCGCGTTGCTGATGAGTATGCCGATCATCG GAACGCAGCTGGTCCCAGTGCGTATCCGCCTGTATCTGGCAATGGCGATCACCCTGGTGATCGCACCGAGCCTGGGGCCGATGCCCGAGGTGGAGGCGCT GAGCCTGCGCGCGATGCTGCTGATCGCCGAGCAGATTCTCATCGGGGTCATGCTCGGCTTCGTCCTGCAGCTGTTCTTTCATCTGTTCATCGTCGCCGGC CAGCTCTTGGCGATGCAGATGGGGCTCGGTTTCGCATCCATGGTCGATCCGGCCAATGGCATCTCGGTGCCGGTGCTCGGCCAGTTCTTCAACATGCTGG TGATCCTGCTGTTCCTGGCGATGAACGGGCACCTGGTGGTGTTCGAGATTCTCACGGAGAGCTTTGTCACCTTGCCGGTCGGGACGGGGTTGTCGACCAA TCACTACTGGGAGGTCGCCAGCAAGCTCGGCTGGGTGCTGGGCGCGGGATTGTTGCTGGTCTTGCCGGCCATCACCGCGCTGCTGGTGATCAACCTGGCA TTCGGCCTGATGACCCGGGCAGCGCCGCAGCTCAACATCTTTTCCATCGGCTTCCCGCTGACCCTGGTGCTCGGTCTGATCGTCGTCTGGATCGGCATGG CCGATATCCTGGCGCAGTACCAGACTTTCGTGGGCGAGGCGCTGCAGATGCTGCGCGAACTGGTAGGGCTGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGAGGCGCGCGCCGAGCAGGGTGGAGGTCGCCGATGGCCGAGAATGAAAACGGCGCGGACAAGAGCGAAGAGCCAACAGAGAAACGCCTGCGCGAGTCGC GCGAGAAAGGGCAGATCGCCCGTTCCCGCGAGCTGAGCACCGTGGCGGTGACTGTCGGTGGCATCGGTGGGCTGCTGGCCTCTGGCGGCGGCCTGGCGCA GGCGTTGATGACGCTGATGCGTGGCAGTTTCGAGCTGAACCGCGAAACGCTGTTCGACCAGGGCAGCATGGTCTTGCTACTGCTCTCGGGCGGCTCGCTC GCGCTCAAGGCGGTGCTGCCGCTGCTGCTGGTCCTGCTGATCGCATCCATCGCCGGCCCTATTGCCCTGGGCGGCTGGCTGTTCTCGGCCAAGGCCATGG CGCCGCAGTTCAGCCGGATGAATCCCGCATCGGGCCTGAAGCGGATGTTCTCCACCAAGGCCCTGGTGGAGCTGCTCAAGGCATTGGCCAAGTTTTCCGT
|
|
| Amino Acid Sequence |
>flagellar biosynthesis protein FliR
MLELSDAQIGAWVAQFMLPLFRVGALLMSMPIIGTQLVPVRIRLYLAMAITLVIAPSLGPMPEVEALSLRAMLLIAEQILIGVMLGFVLQLFFHLFIVAG QLLAMQMGLGFASMVDPANGISVPVLGQFFNMLVILLFLAMNGHLVVFEILTESFVTLPVGTGLSTNHYWEVASKLGWVLGAGLLLVLPAITALLVINLA FGLMTRAAPQLNIFSIGFPLTLVLGLIVVWIGMADILAQYQTFVGEALQMLRELVGLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|