Pseudomonas balearica DSM6083 (=SP1402), CL52_RS05180
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas balearica DSM 6083, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACAGCCGCCTGCCTGGCTGAACACGCTGGAACAGGCGCAGATCAGCGCGCACTGGACGCCAGACATCCTCGCCCGGCTCTGGCGCAAGCTGGCGCTGAA CTGCGCCATCAACCCGCTGACCGTGCTCTACGACTGCCGCAACGGCGGCCTGCTCGAGCATCGCAGCGAAGTGCTGGCGTTGTGCGAGGAGCTCGGGCAC CTGCTAACGGCGATCGGCCAGGCGGAGGCTGCCGACGCGCTGGCCGATGAGGTCTTGCGGGTGATCGAGGCGACTGCCGCCAACTACTCATCCATGCAGC AGGATGTGGCCGCGCGGCGACGCACGGAGATCGGTTACCTGCTCGGCCATGCCTGCCGCACCGGTGCGCAGCAGGGCCTCGCCCTGCCTCGTCTGCAGGC GCTCGCGCGGCGCCTGCAGACGAAGCTGATCGCGCTTGGATTGCCGCCCGACTGACACAGCCGGTACCCTGCAGGCTCCCTCCGCAACCCGGCCAAGCCG
|
|
| DNA Sequence for Gene |
>CL52_RS05180
ATGAACCTGCGTCAGCGTCTCGCCAATCTGCCGGTCGGCCGCAAGCTGCTCACCGCGCTGCTGGTCCTGCTCGCCGCCGTGCTGCTGGTGTCCAATCTCG CCTTCATCAGCGCCGCCTACTGGATCTCCCGCCAGAGCGTCGCGCCCCAGGCGATGCACACCATCGGCGCGCTGTCCTCGATGCCGCACCTGAGCCAGGA CATCCTTACCTCTGCCGAAGACGCCCAAGCCTTTCTGCAACGCCTCGGCGGCTATCCCCCGCTGCGGGCTGCGGCCATCTATGACGCCCGTGGCAACCGC TACGCCCAACTCCAGCGCGGTGAAGCCTTGCCGCTGCCGGAACGCATGGACGAGGTCGCCAGCTGGCGCGCCGGCGAGATCCGCGCCAGCTTTCTCAGCG AGCTGCCCCAGGCAGCGGGCGCACCCGGCCATCTGCTGCTGGTGATCAGCAGCGAACTGCCGGGCGCCTTCTACACCGGCACGCTTACCGCCAGCGCGGC GATCCTGGTGATCAGCCTGCTGCTCTGGCTGCTGGTCGCACGACAGATCCGTCGGCTGATCACCCAACCGATCCGTGACCTGGAGGCGCTGTCCAGACAG GTCACGCGCGAGGAAAACTATGCCCTGCGTTCGGCGCCGGGCAACGGCGACGAGATCGGCCGCCTGGGCGATGCGTTCAACACCATGCTGTCGCGCATCG AGGCACGCGAACAGCAGCTCAAGCGTGCCCGCGACGATGCCCAGGAAGCTTTCAGTCAGGCCCAGGGGCTGGCCGAGGAAACGCGCAACTCCAACCGCCG CCTGGAGCTGGAGGTTCAGGTACGCAGCAAGATCGAGCAGAAACTCACCGGTTTCCAGAACTACCTCAACAGCATCATCGACTCGATGCCGTCCGCACTG ATCGCCCTCGATGAACAGCTCTACATCACGCAGTGGAATCGCGAAGCCAGCGTGCTGTCCGGCACCCCCCTGGACGATGCGCTGAACCAGCCGATCTTCA TCGCCTTCGAGCCGCTCAAACCCTACCTCGCGCAGATCCGCCGGACCGCCGAACGCCGCGAGGTGGAGGTCATCGAGCGGGTCACCTGGACGCGCAACGA TGAAATGCGGCATTACACCCTTACTTTCTATCCGCTGAGCGGGGCCGCCGGACGCGGCGTGGTGATCCGCATCGACGACATCACCCAGCGCATCGGACTG GAAGAAATGATGGTGCAGTCGGAAAAGATGCTGTCGGTCGGCAGCCTGGCGGCGGGAATGGCGCACGAGATCAACAATCCGCTGGGCGCGATCCTGCACA ACGTGCAGAACATCCGCCGGCGCCTGTCGCCCGAACTGGAGCGTAACCGCGAGGTGGCCGAGGAGACCGGCGTGCACCTCGATGCCGTCAACCGCTACCT GCACAAGCGCGAAATCCCGCTGATGCTCGACGGCATTCAGCAGGCCGGCTCGCGCGCGGCCAAGATCGTCAGCCACATGCTCAGTTTCAGCCGCATGAGC AACCGCCAGCTCGCCGAATGCCAGCTCACCGGGCTGATCGAGCAGGCGCTGGAGATCGCCGGCAACGACTTCGCCCTGCTCGACAGCTTCGACTTCAAGG CCATCCGTATCGTCCGCGACTTCGACCCTCGGGTCGACCGGGTGCCCTGCATCGGCAACGAGCTGGAGCAGGTGCTACTCAACCTGCTGAAGAACGCGGC GCAGGCGATTCACCAGAAGCAGGACCGCGACCGCCCGGGACAGATTATCCTGCGCACCCGGTTCCACCCGCCGTGGGCGGAGATCCAGGTCGAGGACAAC GGCGGCGGCATTCCCGAGGCGGTGCGCAAGCGCATCTTCGAGCCGTTCTTCACCACCAAGGAGGTCGGCCAGGGAACCGGACTGGGCCTTTCCGTTTCGT ATTTCATCATCACCAACAATCACAAGGGGCAGATGGAAGTCCAGTCGCAACCCGGCCAGGGCGCCATCTTCACCCTGCGTTTACCGCTGGCCACAGCCGA GCCGGCCAACAGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CAAGGACATGCAATGGGCAACCGACTTTCCAAGATCTACACCCGCACCGGCGACCGCGGTGAAACCGGCCTGGGCGACGGCCGCAGGGTGGCGAAAGACC ATCCGCGCGTCGAGGCCATGGGCGAGGTCGACACCCTCAACAGCCACCTCGGCCTGCTGCTGGCCGAACTGGCCGAAGCGCAGATCCAGTGGCCGGCGCT CGATGAGCTGATTCCGGTGCTCGCGCCCTGCCAGCACCGCCTGTTCGACCTCGGCGGTGAGCTGGCGATGCCCGAGTACCAGGCACTCGACGAGGCGGAA GTCGCCCGCCTGGAGGCTGCGATCGATCGCTGGAATGCCGAACTCGGCCCGCTCAAGGAATTCATCCTGCCGGGGGGCTCGCGCCTCATCGCGCAGGCCC ATCTGTGCCGCAGCCTGACGCGTACCGCCGAGCGACGCTGCCAACAGCTCAGTTCCAGTGAGCCGTTGCGGCCCGTGTTGCTGGCTTACCTGAATCGCCT
|
|
| Amino Acid Sequence |
>histidine kinase
MNLRQRLANLPVGRKLLTALLVLLAAVLLVSNLAFISAAYWISRQSVAPQAMHTIGALSSMPHLSQDILTSAEDAQAFLQRLGGYPPLRAAAIYDARGNR YAQLQRGEALPLPERMDEVASWRAGEIRASFLSELPQAAGAPGHLLLVISSELPGAFYTGTLTASAAILVISLLLWLLVARQIRRLITQPIRDLEALSRQ VTREENYALRSAPGNGDEIGRLGDAFNTMLSRIEAREQQLKRARDDAQEAFSQAQGLAEETRNSNRRLELEVQVRSKIEQKLTGFQNYLNSIIDSMPSAL IALDEQLYITQWNREASVLSGTPLDDALNQPIFIAFEPLKPYLAQIRRTAERREVEVIERVTWTRNDEMRHYTLTFYPLSGAAGRGVVIRIDDITQRIGL EEMMVQSEKMLSVGSLAAGMAHEINNPLGAILHNVQNIRRRLSPELERNREVAEETGVHLDAVNRYLHKREIPLMLDGIQQAGSRAAKIVSHMLSFSRMS NRQLAECQLTGLIEQALEIAGNDFALLDSFDFKAIRIVRDFDPRVDRVPCIGNELEQVLLNLLKNAAQAIHQKQDRDRPGQIILRTRFHPPWAEIQVEDN GGGIPEAVRKRIFEPFFTTKEVGQGTGLGLSVSYFIITNNHKGQMEVQSQPGQGAIFTLRLPLATAEPANS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|