Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS21820
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold9.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCGTGGCCAGGGAAGAAACTTTTGGTCCGCTGGCCCCGCTGTTCCGCTTCAAGGATGAGGCTGAAGTGATTGCGATGGCCAACGACACCGAGTTTGG TCTGGCTTCGTACTTCTATGCGCAGAACATGAGCCGTGTGTTCCGTGTTGCCGAAGCGCTGGAATATGGCATGGTAGGTATCAACACCGGCCTGATCTCC AACGAACTGGCGCCGTTTGGTGGTATCAAGTCGTCCGGTCTGGGCCGTGAAGGCTCCAAGTACGGCATCGAAGATTATCTGGAAATCAAATACCTCTGCC TGTCGGTTTGACTCGGTCTGACTGACGTTGAGGTGTTGCAGCCGATGATGCGCGAGAGCGACGTGTCATCGGCTTTTGTTGCACCGTAGTTTCCTGGTGG CCTGAAGGCTGCAGCAGTCGATCATCGTATGCTGCCGCAGTTGATCCGGTCCGCTTGATCCTTGACCCACGCCGACCGATGAGCGGCGAATGAGGAATAC
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| DNA Sequence for Gene |
>AAY86_RS21820
ATGAGCAAGACTAACGAATCCCTGATGCAACGCCGCCATGCTGCCGTCCCGCGTGGCGTTGGTCAGATCCACCCGATCTTCGCAGCTTCGGCGAAGAACG CGACCGTTACCGACGTGGAAGGTCGTGAATTCATCGACTTCGCGGGCGGCATTGCCGTTCTGAATACCGGTCACCTGCACCCGAAGATTATCGCTGCGGT GCAAGAGCAGCTGACCAAGCTGAGCCATACCTGCTTCCAGGTGCTGGCCTACGAGCCTTACGTCGAGCTGTGCGAGAAAATCAACGCCAAAGTGCCGGGT GATTTCGAGAAGAAAACCCTGCTGGTCACCACCGGTTCCGAAGCGGTTGAAAACGCCGTGAAGATCGCGCGTGCTGCGACCGGGCGTGCGGGCGTGATCG CCTTCACCGGCGCTTACCACGGTCGCACCATGATGACCCTGGGCCTGACCGGCAAGGTTGTACCTTACTCGGCGGGCATGGGCCTGATGCCGGGCGGTAT CTTCCGCGCGCTGTACCCTTGCGAGCTGCATGGTGTGAGCGTTGACGATTCCATCGCCAGCATCGAGCGCATCTTCAAGAACGACGCCGAGCCCAAGGAC ATCGCTGCAATCATCATCGAGCCGGTTCAGGGCGAAGGTGGTTTCTACGTGGCACCGAAGGCGTTCATGCTGCGTCTGCGCGAGCTGTGCGACAAGCACG GCATTCTGCTGATCGCTGACGAAGTGCAGACCGGCGCTGGCCGTACCGGCACGTTCTTCGCGATGGAGCAGATGGGCGTTGCGGCTGACCTGACCACCTT CGCCAAGTCCATCGCCGGTGGCTTCCCGCTGGCGGGCGTGTGCGGCAAGGCTGAATACATGGACGCCATCGCACCGGGCGGTCTGGGCGGCACCTATGCC GGTAGCCCGGTAGCCTGCGCTGCGGCGCTGGCGGTGCTAGATATCTTCGAAGAAGAGCACCTGCTGGACCGTTGCAAGGCAGTCGGCGAGCGTCTGGTGA CCGCGCTCAAGGGCATTCAGGCCAAGTACCCGGTCATTGGCGAAGTGCGTGCGCTGGGCGCGATGATTGCCGTCGAGCTGTTCGAAGACGGCGATTCGCA CAAGCCTAACGCCGCAGCAGTGGCGCAGGTGGTTGCCAAGGCGCGTGACAAGGGTCTGATCCTGCTGTCGTGCGGTACTTACGGCAACGTGTTGCGCGTA CTGGTACCGTTGACCGCTGAAGACGAATTGCTGACCCGTGGGCTGGCCATTCTGGAAGAATGCTTCGCTGAAATCGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAAGTGTGAAGTCGTAAATTGATTAATTTATGACCAAACAGACAAAAAAAGCCCGTTTCGACGGGTTTTTTTTGGTCTGGAGCAGGGTATTTCGCTCTTT TTGCTATATCCGGACGAAGGCTTTGGCTAAGGTGAACGCATCGATGTCGGAGAGTCATGATGACTGCTGTAGATTTGCCCGCGGTACCTCGCGTATTGAT TGCTGAGTCTGATCCGTGGGTTCGCGAAACACTCAGCGATCTGGTACTGGGTGTGCGAGCGGACGTCGACCTGGAAATGTGTACCGATGGCAAGCAGGCC GTCGAATGGATGAAGAAACAACTGCCTGACCTGATCATCGCCGCACGCGAGCTGCCGGGGATCGACGGGTTGAGCCTGTTGCGTGGCGTACGCAACCTGC GTCGTCAGCCCGCCATCCCTTTCATTCTGATCAGCAATCGCAACGACAGCGCCAGCGTGCGTGAGGTCTTGCCACTGGCACCGACTGCCTATCTGACCAA
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| Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSKTNESLMQRRHAAVPRGVGQIHPIFAASAKNATVTDVEGREFIDFAGGIAVLNTGHLHPKIIAAVQEQLTKLSHTCFQVLAYEPYVELCEKINAKVPG DFEKKTLLVTTGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLMPGGIFRALYPCELHGVSVDDSIASIERIFKNDAEPKD IAAIIIEPVQGEGGFYVAPKAFMLRLRELCDKHGILLIADEVQTGAGRTGTFFAMEQMGVAADLTTFAKSIAGGFPLAGVCGKAEYMDAIAPGGLGGTYA GSPVACAAALAVLDIFEEEHLLDRCKAVGERLVTALKGIQAKYPVIGEVRALGAMIAVELFEDGDSHKPNAAAVAQVVAKARDKGLILLSCGTYGNVLRV LVPLTAEDELLTRGLAILEECFAEIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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