Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS19855

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold8.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACTGCCCTGGGCCTCCAGCACAGAGTAAAAACCCTTGCCGCGCCACGCCTCGGTATCACGCGCATCATAAAACAGTCGGGTCGGCGCTACCGCCTCACTG CGCTCGCCCTGGTAAACCGGGATCTTGCTGGCACCACGGCTCACGCCTTCCCCGCTGCCCAGGTTCAACTGGCAGGGAGCGTCGTTGCAGGCATGGCAGG CAACGCATTTCTCGGTAAGGATCGGCTGAATATCCTTTACGTAGGAAATAGCCGGGCTTGCGGGTGTGGCTGAGGGTGTCTGGGCCTGTGCAGCACAGCA GATAAAAAGCAAGGCGATGCTTGCCAACAAACGGTGCGGCATATCCCGTAGGCTCTGTCATTAAAAATGGCACAATTCTACTAGGCCGTCATTGCCTCCA ACATGAATGATTTTCATGCAAAAGCCGCAGCACCACCAAAACCGTTCCGGTTTGCTATCATCCCGTCCTTTAAAGTATCGACCTTCTCAAGGTAGCCCCC
DNA Sequence for Gene
>AAY86_RS19855
ATGTCTGACCGCAGCGCCCGCCATCAAGCCTTTCTCACTGCTCTGAAACAGAGGATTCTGATCCTCGATGGCGGCATGGGCACCATGATTCAGAGCTACA GGCTTGAAGAGCAGGACTATCGGGGCAAGCGTTTCGCCGATTGGCCAAGCGATGTCAAGGGCAACAACGACCTGTTGATCCTGACCCGGCCTGACGTGAT CGGCGCCATTGAGAAGGCTTATCTGGATGCCGGTGCCGACATTCTCGAAACCAATACCTTCAACGCCACTCAGGTCTCCCAGGCCGACTATGGCATGGAG TCGATCGTCTACGAGCTGAACCTGGAAGGCGCGCGCCTGGCACGCAAGGTCGCAGACGCCAAAACCCTTGAAACGCCGGACAAGCCGCGCTTCGTGGCGG GCGTGCTGGGCCCTACCAGCCGCACCTGCTCGCTGTCGCCGGACGTCAACAACCCTGGCTATCGCAACGTCACGTTCGACGAGTTGGTCGAGAACTACAG CGAAGCCACCAAGGGGCTGATCGAGGGCGGTGCCGACCTGATCCTGATCGAAACCATTTTCGACACACTTAACGCCAAGGCGGCGATCTTTGCCGTGCAG GGCGTGTTCGAAGAAGTGGGTTTTGAACTGCCGATCATGATTTCCGGGACCATCACCGACGCTTCGGGACGTACCCTGTCGGGACAGACCACAGAAGCCT TCTGGAACTCGATCAGCCACGCCAAACCGATCTCGGTCGGTCTGAACTGCGCGCTGGGTGCCAGCGAGCTGCGCCCTTACCTGCAAGAGCTGGCCAACAA GGCCAACACCCATGTATCTGCGCACCCCAACGCCGGTCTGCCCAACGCCTTTGGCGAATACGACGAACTGCCGAGCCAGACGGCGAAGATCATCGAAGAG TTCGCCCAGAGCGGTTTCCTGAACATTGTCGGCGGCTGCTGCGGCACCACCCCGGCGCACATCAAGGCGATTGCCGAGGCAGTCTCGGGCTACGCGCCAC GCGAAATTCCGGACATTCCAAAGGCCTGCCGTCTGTCGGGCCTTGAGCCTTTCACCATCGATCGCCAGTCGCTGTTCGTCAACGTCGGCGAGCGTACCAA CATCACCGGCTCTGCCCGCTTCGCCCGCCTGATCCGTGAAGACAATTACACCGAAGCGCTGGAGGTCGCCCTGCAGCAGGTCGAGGCCGGTGCCCAGGTG ATCGACATCAACATGGACGAAGGGATGCTCGACTCGAAGAAGGCCATGGTGACCTTCCTCAACCTGATCGCAGGCGAGCCGGACATTTCCCGCGTACCGA TCATGATCGACTCGTCCAAGTGGGAAGTGATCGAGGCCGGCCTCAAATGCATCCAGGGCAAGGGCATCGTCAACTCCATCAGCATGAAGGAAGGCGTCGA GCAGTTCATTCATCACGCCCGCCTGTGCAAGCGCTATGGTGCAGCCGTGGTGGTCATGGCCTTCGATGAACAGGGGCAGGCCGACACCGAGGCGCGCAAG AAGGAAATCTGCAAGCGCTCCTACGACATTCTGGTCAACGAAGTGGGCTTCCCGCCGGAAGACATTATCTTCGACCCGAACATCTTCGCCATCGCTACCG GTATTGAAGAGCACAACAACTATGCCGTGGACTTCATCAACGCCTGCGCCTACATCCGTGACGAGCTGCCGTATGCGTTGACCTCGGGTGGCGTGTCCAA CGTGTCGTTCTCGTTCCGCGGCAACAACCCGGTGCGCGAGGCGATTCACTCGGTGTTCCTGCTGCATGCGATCCGCAACGGCCTGAGCATGGGCATCGTC AACGCCGGCCAGCTGGAAATCTACGACCAGATCCCTGCTGAACTGCGTGACTGCGTCGAAGACGTGGTGCTCAACCGTAACGCCGAAGGCACCGACGCAC TGCTGGCAATTGCCGACAAGTTCAAGGGTGATGGCAGCGTCAAGGAAGCGGAAACCGAGGAATGGCGCAGCTGGCCGGTCAATCAACGGCTGGAGCATGC GCTGGTCAAGGGCATCACCACTCATATCGTGCAGGACACCGAAGAGTCGCGTCTGGCATTCACCCGCCCCATCGAAGTGATTGAAGGCCCATTGATGGCG GGCATGAACGTGGTCGGTGACCTGTTTGGCGCAGGCAAGATGTTCCTGCCTCAGGTGGTGAAGTCCGCACGGGTCATGAAACAGGCAGTCGCGCACCTGA TCCCGTTCATCGAGCTGGAAAAAGGCGACAAGCCCGAAGCCAAGGGCAAGATCCTCATGGCCACGGTCAAAGGCGACGTCCATGACATTGGCAAGAACAT CGTCGGCGTGGTGCTGGGCTGTAACGGTTACGACATCGTTGATCTCGGGGTGATGGTGCCTGCCGAGAAAATCCTTCAGGTGGCGCGCGACGAAAAGTGC GACATCATTGGTCTGTCAGGCCTGATCACGCCATCGCTGGACGAAATGGTCCATGTTGCCCGGGAAATGCAGCGTCAGGACTTCCATCTGCCCTTGATGA TCGGTGGCGCGACCACCTCCAAAGCCCACACTGCGGTCAAGATCGAGCCTAAATACAGCAATGATGCAGTCATCTACGTCACCGACGCTTCACGTGCGGT GGGCGTGGCGACCCAGTTACTGTCGAAAGAACTGAAACCGGCCTTCATCGAAAAGACCCGCCTGGAATACGTCGAAGTACGTGAGCGTACCTCGGCACGC AGTGCGCGCACCGAGCGTTTGAGCTATGGCGCGGCGGTGGCGAAGAAGCCGCAGTTCGACTGGGAAAACTATACCCCTGCCCAACCGACCTTCACCGGCA CCCGGGTTCTGCAGGATATCGACCTGAACGTGCTGGCCGAATACATCGACTGGACACCGTTCTTCATCTCCTGGGATCTGGCCGGTAAATACCCGCGCAT CCTGACCGACGAAGTGGTCGGTGAAGCGGCCACCGCGCTGTATGCGGACGCCACCCAGATGCTGCGCAAGCTGATCGACGAGAAACTGATCAGCGCCCGT GCAGTATTCGGCTTCTGGCCAGCCAATCAGGTCAACGATGATGATCTGGAAGTCTATGGCGACGACGGCAAGCCGCTGGCGAAGCTGCATCACCTGCGCC AACAGACCATAAAGCCTGACGGCAAGCCGAATTTCTCGCTGGCCGACTTCGTCGCGCCGAAAGACAGTGGCCTGACCGACTACATCGGTGGCTTCATCAC CACAGCCGGCATTGGTGCCGAAGAAGTTGCCAAGGCGTATCAGGACAAGGGCGACGACTACAACTCGATCATGGTCAAGGCGCTCGCCGACCGTCTGGCC GAGGCCTGTGCCGAATGGCTGCACCAGCAGGTGCGCAAGGAATACTGGGGTTACGCGAAAGACGAGGCGCTGGACAACGAGGCGTTGATCAAGGAGCAAT ACATGGGCATTCGTCCGGCTCCCGGCTACCCGGCCTGCCCGGATCACACCGAAAAAGGCACCCTGTTCGCCCTGCTCGATCCACTGCCGGAAGGCACACC CGAACATACGCCCGGCAAAAGCGGCGTGTTCCTGACCGAGCACTACGCAATGTTCCCGGCTGCGGCCGTCAGCGGCTGGTATTTTGCCCATCCTCAGGCG CAGTACTTTGCGGTAGGCAAGGTGGATAAGAATCAGGTCGAAAGCTACACCGCCCGCAAAGGCCAGGACCTGAGCGTCACCGAGCGCTGGCTGGCACCGA ACCTGGGTTATGACGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCACTGACCCGGCTACTTGCCGCCTGGGCGATCAGGCGGCAACATGTTTTTCAGGGAAAACGGTGAGTCCTCGCCAAAAGCCCCCACGTTGAATGCCTGA ATATCAAGCCGGTAGCGCTCCTCACGGGTTGCGTTCAGAAAGCGCTGCGTGTCCTGCGGCTCGACCAGGTGCAGTACATCGATAGTGCGCGCGCCGACCT GTTGCCGGGCTTGCCGCTGGGCAGTGTCATAGCGGTGCAACAGGATGATTGCCCATCCGCCAAGGGTGAAATGCCCGGTAGCAACCACGCTCAGGTTGCC ATTGAGCTGGGCCTGCAATGAAAGCGAGGTGCCATTAATGGCACTGAACAACACATCTTCACCCGGTTTACCGCCTTTTTCCCGCAATGCATCCATCGCA CCGAACGCCATTTGCTCATTGGCAGCCCATACCAGGCGTGTCTGCGGGTAGCGTTTGAACAACACGCGCGCCTGCTCGAGTGCGCGATCCCGACGCCATC
Amino Acid Sequence
>B12-dependent methionine synthase
MSDRSARHQAFLTALKQRILILDGGMGTMIQSYRLEEQDYRGKRFADWPSDVKGNNDLLILTRPDVIGAIEKAYLDAGADILETNTFNATQVSQADYGME SIVYELNLEGARLARKVADAKTLETPDKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYSEATKGLIEGGADLILIETIFDTLNAKAAIFAVQ GVFEEVGFELPIMISGTITDASGRTLSGQTTEAFWNSISHAKPISVGLNCALGASELRPYLQELANKANTHVSAHPNAGLPNAFGEYDELPSQTAKIIEE FAQSGFLNIVGGCCGTTPAHIKAIAEAVSGYAPREIPDIPKACRLSGLEPFTIDRQSLFVNVGERTNITGSARFARLIREDNYTEALEVALQQVEAGAQV IDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHARLCKRYGAAVVVMAFDEQGQADTEARK KEICKRSYDILVNEVGFPPEDIIFDPNIFAIATGIEEHNNYAVDFINACAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLHAIRNGLSMGIV NAGQLEIYDQIPAELRDCVEDVVLNRNAEGTDALLAIADKFKGDGSVKEAETEEWRSWPVNQRLEHALVKGITTHIVQDTEESRLAFTRPIEVIEGPLMA GMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQVARDEKC DIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPAFIEKTRLEYVEVRERTSAR SARTERLSYGAAVAKKPQFDWENYTPAQPTFTGTRVLQDIDLNVLAEYIDWTPFFISWDLAGKYPRILTDEVVGEAATALYADATQMLRKLIDEKLISAR AVFGFWPANQVNDDDLEVYGDDGKPLAKLHHLRQQTIKPDGKPNFSLADFVAPKDSGLTDYIGGFITTAGIGAEEVAKAYQDKGDDYNSIMVKALADRLA EACAEWLHQQVRKEYWGYAKDEALDNEALIKEQYMGIRPAPGYPACPDHTEKGTLFALLDPLPEGTPEHTPGKSGVFLTEHYAMFPAAAVSGWYFAHPQA QYFAVGKVDKNQVESYTARKGQDLSVTERWLAPNLGYDE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site