Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS19080

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07724
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 155 347 1.4E-68
Gene3D G3DSA:1.10.1780.10 - IPR036628 Clp, N-terminal domain superfamily 3 153 1.9E-17
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 348 545 1.4E-44
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 773 843 1.5E-10
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 347 438 1.9E-27
NCBIfam TIGR03345 JCVI: type VI secretion system ATPase TssH IPR017729 AAA+ ATPase ClpV1 14 851 0.0
Gene3D G3DSA:1.10.8.60 - - - 770 862 6.4E-9
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 676 694 1.5E-32
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 165 512 4.61E-68
SUPERFAMILY SSF81923 Double Clp-N motif IPR036628 Clp, N-terminal domain superfamily 19 126 2.94E-11
Pfam PF02861 Clp amino terminal domain, pathogenicity island component IPR004176 Clp, repeat (R) domain 24 66 2.1E-4
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 769 861 2.1E-6
Coils Coil Coil - - 417 437 -
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 598 763 3.4E-40
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 203 349 2.5E-9
FunFam G3DSA:3.40.50.300:FF:000025 ATP-dependent Clp protease subunit - - 551 767 6.2E-80
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 551 767 1.2E-64
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 602 620 1.5E-32
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 547 835 3.01E-55
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 598 755 4.7E-6
PANTHER PTHR11638 ATP-DEPENDENT CLP PROTEASE - - 20 851 0.0
CDD cd19499 RecA-like_ClpB_Hsp104-like - - 566 767 3.15503E-80
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 709 723 1.5E-32
FunFam G3DSA:3.40.50.300:FF:000010 Chaperone clpB 1, putative - - 154 347 1.1E-83
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 647 665 1.5E-32
CDD cd00009 AAA - - 188 346 2.51233E-16
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 208 341 2.7E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.