Strain | Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold7.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCGTACTTACCGGATGGACACTCACCAACGCCCTGCAAGGCATCCGCCCTTTGACCTTCTGGGCTCTGCCAGCGGTGGGAAGCTGGTTGCTGATCGTAT TGCTGCCTGCGGCACTACCAAACGACGTGGTGTACAACAAGACTCCCGACCAGTTTGTCGCCAGGCATCAAACGGAGCTGGCAGCCTGTACACATTTGCT GAGCAATGATCTGGGCGCTGCTTCTGCCATGTCGTGGCGCCTGAAACGACCGGACATCGCGCTTTTCAATACTTGGGGCGAGCTTGAATACGGCCTGGGT TATCCGGATGTACAGGGCCGCCAAGTCCGTCTGCAGGACATCGACGCCTGGATTACAAAAGCCCGAAGCGAAGGCAGGGTCGGCGTGATCATGCGTGGCA AGAGTGATGATGAGCTGGAGGAGCTTGAAATGCTTCCCAAGGACGGCCAGCGTTACGACGAAGGCAACCTGGCCATCCTCATTTATGAGAAGTCAGCGTT
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DNA Sequence for Gene |
>AAY86_RS17850
ATGACCTGGCTGATGCTCCTGAGCGCATGCCTGCTGACGTGCCTGGGCCAAATCGCACAAAAGTACGCAGTGGAAGGCTGGCGCGGGACATTTCCCGGCG TATTTGCTGCACTGCGTTCAATATGGCTGTGGCTGGCGATTGCCTGCCTCGGGCTGGGTCTGCTGGTCTGGCTGTTGGTGCTGCAACGCATGGATGTAGG CATCGCGTACCCCATGCTGGGCCTCAACTTCGTGCTGATCACCCTGGCGGGACGCTATGTTTTCAAAGAGCCGGTTGACCCACAGCACTGGCTTGGTATT GCGCTGATCCTTGTCGGCGTATTTCAGCTGGGACGCCAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGCCGTAGCGCAACGATGTACGCCATGACCAGTGTTGTACTGGTCAGTTCGGCGCAATTGGGCATGCGCTGGGGCATGAGCCGCCTCCCCTCGCCTGG GCAATGGCTCGACCTGCAGGATATCGGGCAGGCTCAGTCCAGTGCCGTCGCCGTCATCTGCGCCTCGATCACAGCCTATGCACTCTCCATGCTTTTCTGG CTGCTGGCGCTGCGTGATTTGCCCCTCAGCCGTGCCTATTCGCTCCTCAGTATCAGCTATGCACTGGTTTATACGCTGGCTGCAACCCTGCCATTTTTCC ATGAGACGTTCACGGTATCGAAAACTGTGGGTGTCACGCTGATTGTGGCAGGTGTCTTGACCATCAACCTGCGGCGCATCTCCAGCCCGTCACTTCAGGA TCTTCCCCATGAGAATCAGCGTTTTCGGTAGCGGATATGTAGGTCTGGTACAAGCGACCGTACTTGCCGAAGTCGGCCATGATGTTGTCTGTATGGACAT
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Amino Acid Sequence |
>4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit E
MTWLMLLSACLLTCLGQIAQKYAVEGWRGTFPGVFAALRSIWLWLAIACLGLGLLVWLLVLQRMDVGIAYPMLGLNFVLITLAGRYVFKEPVDPQHWLGI ALILVGVFQLGRQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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