Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS16695

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold6.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCTGTTGGAAACGTTTCTCCGGAAGCGCTTCCTTGAACAAAAGGATTGCCCACATGGCACTCAGCGTTGAAGAAAAAGCTCAGATCGTAACCGACTAC CAGCAAGCTGTTGGTGATACTGGTTCGCCAGAAGTGCAAGTTGCACTGCTGACCGCCAACATCAACAAACTGCAAGGCCACTTCAAGGCCAACGGTAAGG ACCACCACTCGCGTCGTGGTCTGATCCGTATGGTAAACCAGCGTCGCAAGCTGCTGGATTACCTGAAAGGTAAGGACGTTAGCCGTTACAGCGCCCTGAT CGGTCGTCTGGGTCTGCGTCGCTAATAACGACGTTGCTAGAGGTTGGTTGTCTGTCACGATCCGTCGGGTTTTCCCGGTGGTTCTGGCAGGCTCCCAGCC TCAAGTTTTATCTGGACTGTGGAAGGGGCCGATTCCCCACGCTGCCCAAGAATTCGCAAGAAACCAGTTCCCCAAGAGCCACAAAGAAAGGTAGGAAACC
DNA Sequence for Gene
>AAY86_RS16695
GTGAACCCGGTAATCAAAAAGTTTCAGTTCGGTCAATCGACCGTAACCCTCGAGACAGGCCGTATCGCCCGTCAAGCCTCTGGCGCAGTATTGGTCACCG TTGACGACGACGTCAGCGTACTCGTGACTGTGGTCGGCGCCAAACAGGCTGACGCTGGCAAAGGCTTCTTCCCTCTGTCCGTGCACTATCAGGAAAAAAC CTACGCTGCCGGCAAGATTCCTGGTGGTTTCTTCAAGCGTGAAGGCCGTCCTTCCGAGAAAGAAACCCTGACCTCGCGCCTGATCGACCGTCCGATCCGC CCGTTGTTTCCAGAAGGCTTCATGAACGAAGTGCAGGTTGTCTGCACCGTCGTCTCCACCAGCAAGAAAATCGATCCGGACATCGCTGCGATGATCGGTA CTTCGGCTGCACTGGCCATCTCCGGTATTCCGTTCGACGGTCCGGTCGGTGCTGCGCGCGTTGCTTTCCACGAAAGCACTGGCTACCTGCTGAACCCGAC TTACGAGCAACTGCAGGCTTCGAGCCTGGACATGGTCGTAGCCGGTACTTCCGAAGCCGTTCTGATGGTTGAATCCGAAGCCAAAGAGCTGACCGAAGAC CAGATGCTGGGCGCTGTTCTGTTCGCCCATGACGAATTCCAGGTGGTGATCAACGCCATCAAGGAATTGGCTGCAGAAGCCGCCAAGCCTGTCTGGGACT GGCAGCCAAAGCCTGAAGCCACCGCACTGCTGGGTGCTATCCGTGCCGAGTTCGGCGACGCGATCTCCCAGGCTTACACCATCACTGTCAAAGCCGACCG CTATGCGCGTCTGGGCGAGCTGAAAGACCAGGTCGTTGCCAAGCTGGCTGTCGAAGAAGGCAGCCCGTCTGCCAGCGAAGTCAAAGCTGCTTTCGGTGAA ATCGAATACCGCACCGTTCGCGAAAACATCGTCAACGGCAAGCCGCGTATCGATGGTCGCGACACTCGCACCGTTCGCCCGCTGAACATCGAAGTTGGCG TTCTGCCGAAGACTCACGGTTCGGCACTGTTCACCCGTGGCGAAACTCAGGCGCTGGTTGTTGCAACGCTGGGTACCGCGCGCGACGCACAGCTGCTCGA CACCCTTGAAGGCGAGAAAAAAGACCCCTTCATGCTGCACTACAACTTCCCTCCGTTCTCGGTGGGCGAGTGTGGTCGCATGGGCGGCGCGGGCCGTCGT GAAATCGGTCACGGCCGTCTGGCCCGTCGCAGCGTTCAGGCCATGCTGCCAGGCGCCGACGTGTTCCCGTACACCATCCGTGTCGTGTCGGAAATCACCG AGTCCAACGGTTCCAGCTCCATGGCTTCGGTCTGCGGCGCTTCCCTGGCACTGATGGACGCTGGCGTTCCGATGAAGGCACCGGTTGCCGGTATCGCCAT GGGTCTGGTCAAGGAAGGCGAGAAGTTCGCCATTCTGACCGATATCCTGGGTGACGAAGATCACCTGGGCGACATGGACTTCAAGGTAGCCGGTACCTCC AAAGGTGTTACCGCGCTGCAGATGGACATCAAGATCAAAGGCATCACCGAAGAAATTATGGAGATCGCCTTGGGTCAGGCCCTGGAAGCTCGCCTGAACA TCCTCGGTCAGATGAACCAGATCATCGGTCAGTCGCGTAACGAACTGTCGGCCAACGCTCCGACCATGATCGCGATGAAGATCGACACCGACAAGATCCG TGACGTGATCGGCAAGGGTGGTGCAACCATCCGTGCTATCTGCGAAGAGACCAAGGCTTCGATCGACATCGAAGACGACGGCTCGATCAAGATCTTCGGC GAGTCCAAGGAAGCGGCTGAGGCAGCACGTCAGCGCGTTCTGGGCATTACCGCAGAAGCCGAGATCGGCAAGATCTACGTCGGTAAGGTTGAGCGCATCG TCGATTTCGGCGCGTTCGTCAACATCCTGCCGGGCAAGGACGGTCTGGTTCACATCTCGATGCTGAGCGATGCTCGCGTAGAGAAAGTGACCGATATCCT CAAGGAAGGTCAGGAAGTCGAAGTGCTGGTACTGGACGTGGACAACCGCGGTCGTATCAAGCTGTCGATCAAAGACGTAGCGGCAGCGAAGGCGTCGGGC GTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGATCTGAGCGGCGTGTGAAAAAGGACTCTTCGGAGTCCTTTTTTTATGAGCGCAATTAGAGGGTTACAAACGGGGCATGCAAACTGCTCGGTGCAAAC ATGCATCTTGCAAGCCCGATTAGTGACGAACGGGCAAACTGCACGACCTGGTGGAAAACAAAAAAACACAACCTTATGATTTTAAAGGGTTTTTAGTGTT TTTCGTTTTTGGCACACCGCTTGCGATATACCTGTTAACCCTGCCACCACACGCTGGTGCAGATTTCGAGAAAAACAGGAGTTATCGTATGAAGAAGTTC GCTATTGCCGCTGCTACCGCTACTGCCCTGACTCTGACCATGGCCAACGCTGCTTTCGCACAGACCTCGGCCCAAGCGCCAATGGTTCTGGCAGCCAACA CCACTACTCAAGAAGTCAAAGAAGATACTTCTGACACTTGGATCACCACCAAAGTCAAAGCTGACCTGCTGACCGAGAAAGGCATCCCAGGTTCGGACAT
Amino Acid Sequence
>polyribonucleotide nucleotidyltransferase
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADAGKGFFPLSVHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIR PLFPEGFMNEVQVVCTVVSTSKKIDPDIAAMIGTSAALAISGIPFDGPVGAARVAFHESTGYLLNPTYEQLQASSLDMVVAGTSEAVLMVESEAKELTED QMLGAVLFAHDEFQVVINAIKELAAEAAKPVWDWQPKPEATALLGAIRAEFGDAISQAYTITVKADRYARLGELKDQVVAKLAVEEGSPSASEVKAAFGE IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRR EIGHGRLARRSVQAMLPGADVFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILTDILGDEDHLGDMDFKVAGTS KGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQIIGQSRNELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG ESKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASG V
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site