Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS13650

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold5.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGAAGAAATCTCGGTCGGTGTCATTGACGCCGAGGTTCAGCACAAGGCTGTCTCCATGCGCGTGCTGACGGTCGATGACTCGTCGGTGGCCCGCAAGCA AGTGAGCCGCTGCCTGGAAACCGTCGGGGTGGAGGTGGTCGCGCTCAACGATGGTCGTCAGGCGCTGGACTACCTGCTCAAGATGGTCGCAGAAGGCAAA AAGCCTGAAGAAGAGTTCCTGATGATGATCTCCGACATTGAAATGCCGGAGATGGATGGCTATACCCTTACCGCAGCAATACGTAATGATCCACGCATGC AGAAGATGCACATCACCTTGCATACCTCGTTGTCAGGGGTATTCAACCAGGCGATGGTCAAGAAAGTCGGCGCGGATGACTTTCTCGCGAAATTCCGGCC TGATGATCTGGCGGCCAGGGTCGTTGCGCGGATCAATGCAGCAGAATAACCAGCCGGGGGCGTCGTCCCCGGTGATTCACATGATTTGAGAGGCGGCACC
DNA Sequence for Gene
>AAY86_RS13650
TTGTCTACGGGTAATTTGGATTTTGATCAGTTCCGGGTATTTCTGGAAAAAGCCTGTGGCATCTTGCTTGGGGAAAACAAGCAGTATCTGGTGTCCAGCC GCCTCAACAAACTGATGGAGCAGCAAAGCATCAAGTCGCTTGGCGAGTTGGTTCAGCGCATCCAGACCCAGCCGCGCAGCGGGTTGCGCGAACAGGTTGT CGATGCGATGACCACCAACGAAACCCTGTGGTTTCGCGATACCTATCCGTTCGAAGTGCTGAAGAACAAAGTGCTGCCCGAGCAGATCAAGGCCAGCCCT GGTCAGCGACTGCGCATCTGGTCGGCGGCCTGTTCATCGGGCCAGGAACCGTACTCACTGTCGATGTCGATCGATGAGTTCGAGCGCGCCAATCAGGGCC AGCTCAAATCGGGCGTGCAGATTGTTGCCACCGATTTGTCTGGTGCAATGCTCAACAACTGCAAGACTGGCGAGTACGACAGCCTGGCTATCGGCCGCGG CTTGTCGCCGGATCGTCTGCAGCGTTTCTTTGATGTAAAAAGTCCGGGTCGCTGGGTCGTCAAGACGCCGATCAAGAGCCGTGTGGAGTTCCGCTCGTTC AACCTGCTCGACAGCTACGCCTCGCTGGGCAAGTTCGACATCGTGTTCTGCCGCAACGTATTGATCTACTTCTCCGCTGAAGTGAAGAAGGACATCCTGC TGCGCATCCACGGTACGCTCAAGCCAGGCGGTTACCTGTTTCTGGGGGCTTCCGAAGCGCTCAATGGTTTGCCGGATCACTATCAGATGGTTCAGTGCAG CCCCGGGATCATCTATAAGGCCAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGTCTGTCAGTTGCCTGCGCTGAAAAAAGAGACCTTCGGGTCTCTTTTTTTGTGCGCGGCTGAAAACAGCTTCGATCGTCTGCCCATCGATTCATGTTT GCGTACTGTTACTCACCAGTTTGGCAAAAGCGTTGGCGGCGGCGCTCTGGTATCCGTTTTTACGCCGCAGCAGCGCAACCGTTCGCCCAGGCAGGGCAGG GATCGTCTGAACTTCGCGCAACCCGGGCTGCTCGCGAACGATGGCATCGGGAAGAATGGTCGCCATGCGCCCCTGGGCAACAACCTTGAGCAAAATGGCG ATCGAGTTCGCCTCCAGGTTGACCGCAGGCTTGAAATTCTGCGTCTGGCACCAGGCATCCAGCAGCTGGCGAGTGGCGAATCCGGGGGCGAGCAAGGCAA AGCGAAGCGTTTGCAGGTCCTCAAGTGTCAGCGCTGTCTGTTTTTCGGGGGCAGGTTTTGCCATGACCAGGCACAGTTGTTCATCGAACAGAGGCTGGCT
Amino Acid Sequence
>chemotaxis protein CheR
MSTGNLDFDQFRVFLEKACGILLGENKQYLVSSRLNKLMEQQSIKSLGELVQRIQTQPRSGLREQVVDAMTTNETLWFRDTYPFEVLKNKVLPEQIKASP GQRLRIWSAACSSGQEPYSLSMSIDEFERANQGQLKSGVQIVATDLSGAMLNNCKTGEYDSLAIGRGLSPDRLQRFFDVKSPGRWVVKTPIKSRVEFRSF NLLDSYASLGKFDIVFCRNVLIYFSAEVKKDILLRIHGTLKPGGYLFLGASEALNGLPDHYQMVQCSPGIIYKAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site