Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS13625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold5.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCCCGCAATCATTGGCTTTTGCAACATGGCACGCTGATTGCTTTGTCAGTAACAACAGAATCAGGTCAACCGGCAAAGGTTTCCCGAAATGAGCATCAG CTTCGATAAAGCGCTAGGCATACATGAAAAGGCTCTGAACTTCCGGGCTCAGCGTGCAGAGGTGTTGGCCAACAACATCTCCAACGCCGATACCCCGAAC TTCAAGGCTCGCGATCTGGACTTCTCGTCGGTGCTGGCTGCCGAAAACGACAAGGTGCAGAACGGTCATTTCGCGCTGAACAAGACCAACAGCCGCCATA TCGAAGCCGAAGGCATGGGCAATGATGACGGGACGCTGCTGTATCGCACCCCGTCGCAGCCTTCGCTGGACCAGAACACCGTCGATTCCCAGGTCGAGCA GGCCAGCTACACCGAGAACGCCATGGGCTTTCAGGCCAGCTTCACATTGCTCAACAGCAAGTTCAAGGGGCTGGTTGCAGCCCTTCGCGGAGAATAATTC
DNA Sequence for Gene
>AAY86_RS13625
ATGTCACTAGCCAATGTGTTCAACATTGCCGGTAGCGCCATGAGTGCCCAGACCACGCGTCTGAACACTACGGCCAGTAACATCGCCAACGCCGAGACCG TGTCTTCGAGCATGGACCAGACCTACCGCGCCCGTCACCCGGTGTTTGCCACCGTGATGCAGGGTCAGCAGTCCACAGGCGGTTCGCTGTTCCAGGATCA GGGGGAAGCCGGGCAGGGCGTTCAGGTCAACGGCATCATCGAAGACAGCTCGAACCTGGAAGCACGTTACGAGCCCAATCATCCTTCCGCTGACAAGGAC GGGTATGTCTACTACCCCAACGTCAATGTCGTGGAAGAAATGGCCGACATGATTTCTGCCAGCCGGTCTTTCCAGACCAACGCCGAAATCATGAACACCG CTAAATCCATGATGCAGAAGGTTCTGACCCTCGGTCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAGAAGGCGAACGTTATGGCCGATAACACCACAGCAAGCAGCGTCTCATCGACGTTCTTGAACACACTGCAGAATCCGACGCCCACCGCGACGAATTCCA CCGGTACGCTAGGCAAGGACGCGTTCCTGCAGCTGCTCGTGACGCAGATGAAAAACCAGAACCCGCTGGACCCACAGGACAACACTCAGTTCGTGGCCCA ACTGGCGCAGTTCAGCAGCCTTGAAAGCATGCAGAACCTGACGTCGACGGTTGACACGATTGCAACCAGTTACAAGTCGTCTCAGGCGTTGCAGGCATCG TCGCTGGTAGGTCGCTCGGTGATCATCGATTCGAGCTCCACCACCGTGGATACCACCAAGGGTATGACCGGTTCGATCGTTATTCCGAGCGCCACTACGG CGACAAGTATCAAGGTTTACGATTCGCAATCGAATCTGGTCGACACCGTCGAGCTGGGCGCGCAGAAAGTCGGCACCGCCAGCTTTTCCTGGGACGGTAC
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLANVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRARHPVFATVMQGQQSTGGSLFQDQGEAGQGVQVNGIIEDSSNLEARYEPNHPSADKD GYVYYPNVNVVEEMADMISASRSFQTNAEIMNTAKSMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site