Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS11230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold4.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCAACTGAGCAAGGCCGTCGAGGCTGCGGCGCAGTTGCTGGGCGTACGCCTGGAGCAGTCTGGCCTGACGTTACACCGAGACTTCGTCGACGCCACCCT GAGCATCGACCAGACCCGCCTGGAACAGATCCTGGTCAATCTGATCGGCAATGCGCTGGACGCCATGTTCAACCAGCCAGCGCCCGAATTGTGGCTCACC GGGTCAATTGAAGACGGGCGTTATCGCTTGCGGGTACGTGATAACGGGCACGGCATCGATACCGAAACCCGCAAGCACCTGTTCGAACCTTTCTTCACCA CCAAACCCGGCGAACAAGGCCTGGGACTGGGCCTGACCCTGTCGGCGAGCCTCGCCGCCGCAGCCGGGGGCAGCCTGAGCGCAGAGCACCCAGGTGACGG CGGCACAACATTTGTCCTGAGCCTGCCGTTTGTCCCCGATGCCCCGACCGACAATCGCCCGAGCGGCCCGGCCCAGGTGGACTGACATGAGACGACACCC
DNA Sequence for Gene
>AAY86_RS11230
ATGAGCATCAACAGCGACCTGACCGTGCTGATCGTCGAAGACGACCCGCATGTGTTGCTCGGCTGCCAGCAGGCGCTGGCGCTGGAAGACATTGCCAGCG AAGGCGTATCCAGCGCCGAAGACGCCCTCAAGCGCATCGGTGACAATTTTGCCGGTATCGTCATCAGCGACATTCGTTTGCCGGGTATCGACGGGCTGGA ATTACTGAGCCGCCTCAAGGCGCGTGACAGCAGCCTGCCGGTGGTGCTGATCACCGGCCACGGCGACATCACCATGGCCGTCAACGCAATGCGCGATGGT GCTTACGATTTCATGGAGAAACCCTTTTCTCCCGAGCGCCTGGTCGACGTCACCCGGCGCGCGCTGGAGCAGCGCGGGCTGGCCCGGGAAGTCTGGGCGT TGCGCAAGCAACTGGCCGAACGCGATTCGCTGGAAGGCCGAATCATCGGCCGCTCCCCCGCCATGCAAAACCTGCGTGCATTGATTACCAACGTCGCCGA TACGTCGGCCAATGTGCTGATCGAAGGCGAGACCGGCACCGGCAAGGAGCTCGTCGCGCGCTGCCTGCACGACTTCAGCCGACGCAAGGACAGTCAGTTC GTGGCACTCAATTGCGGCGGGCTGGCAGAAAGCCTGTTCGAGTCGGAAATTTTCGGTCACGAAGCCAATGCATTTACCGGCGCGGGCAAGCGGCGCATCG GCAAGATCGAACACGCCCACAATGGCACGCTGTTTCTCGATGAAGTGGAAAGCATGCCGGTCAACCTGCAGATCAAACTGTTGCGCGTCCTCCAGGAACG AACTCTGGAGCGGCTTGGTTCGAACCAAAGTGTTGCAGTGGATTGCCGGGTCATTGCGGCGACCAAATCCGACCTCAATGCACTGAGCAAGACCAGTCAG TTCCGCAGCGACCTGTATTACCGTCTGAACGTCGTCACGCTGGAGCTGCCGCCATTGCGTGAGCGCCGCGAAGACATTCTGCAACTGTTCGAACACTTCC TGCAGTTGTCGTCATTGCGCTTCGACCGTGAGCCGCCGACGCTGGACAGACAGACCAGTTCAAGCCTGATGAGCCACGACTGGCCGGGTAACGTGAGGGA ACTGCGCAACGTAGCCGAGCGGTTTGCCTTGGGTCTGCCGGCGTTCAAACAGGCAGGCACGGTCAGTGAAAATCAAAGCCTGGGGTTTGCCGAAGCGGTT GAGGCCTTCGAACGATCCCTGCTCAGCGAGGCCCTGCAACGCAGCGGCGGCAACCTCAGCCAGGCCAGTCAGGAACTGGGCATGGCCAAGACCACCTTGT TCGACAAGGTCAAGAAATACGGGCTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCACTGTGTCCAATCTTGAGTGTGCGGTATCGCGCAGATCTGTGACGCAGAGCGTCACCCACTGCATTCCCACGCTGGAGCGTGCGGAACGATAGGCGTC CGCACGACACCGATCCTGCACAGACAGTGCGTTACTTCGACTCGCTGAGCATCTGCCGGATCGCGCTGACGAACACTTCAACCGGCTGCCCGCCCGATAC CGCGTACTGGTCGTTGAAGACCATGGTCGGCACGGAGGTGATACCGCGGGATGTCCAGAGTTGCTCGGCTTCGCGGACCTCTGCGGTGTACTCGCCGCTG TCGAGGATGGCCTGAGCACGCAAACGGTCCAGGCCGACCTTCTGCGCTACGTCTGCCAGAGTCTGGTGGCTGGACGGGTCTTTCAGGTCACTGAAATAGG CTTCGAACAGCGCCTGCTTCAATACGTACTGCTTGCCTTGTTGTTCGGCCCAGTGCAACAGGCGATGAGCATCGAACGTGTTGTAGATACGTCGCTCGCC
Amino Acid Sequence
>Fis family transcriptional regulator
MSINSDLTVLIVEDDPHVLLGCQQALALEDIASEGVSSAEDALKRIGDNFAGIVISDIRLPGIDGLELLSRLKARDSSLPVVLITGHGDITMAVNAMRDG AYDFMEKPFSPERLVDVTRRALEQRGLAREVWALRKQLAERDSLEGRIIGRSPAMQNLRALITNVADTSANVLIEGETGTGKELVARCLHDFSRRKDSQF VALNCGGLAESLFESEIFGHEANAFTGAGKRRIGKIEHAHNGTLFLDEVESMPVNLQIKLLRVLQERTLERLGSNQSVAVDCRVIAATKSDLNALSKTSQ FRSDLYYRLNVVTLELPPLRERREDILQLFEHFLQLSSLRFDREPPTLDRQTSSSLMSHDWPGNVRELRNVAERFALGLPAFKQAGTVSENQSLGFAEAV EAFERSLLSEALQRSGGNLSQASQELGMAKTTLFDKVKKYGL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site