Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS09610

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold4.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCAAGATCATCAGCGTTGACCGCAAGAGCCGCGTAATCAGCTTGTCCATCAAGTCGAAAGACGTTGAAGACGAGAAAGAAGCCATTCAGAGCCTGCGTA GCAAGCCTGAAGTCGCTGAAAGCACTGGTCCTACCACCATTGGTGACCTGCTGCGCGCGCAAATGGAAAAACAGAACTAAGTTCTGCTTGGCCACAAAAA GGACGACTTCGGTCGTCCTTTTTTATTTCTGCTGCTAAGGCCTTACAGGCCCTTGTTTCAGGAGTGTCTGCACATGCACTGCCCTAGCGGCCAAATGTCC TCAGTGGCCTCTCAGGCCGTCTCTATTCTTCGAATGCTCCAGCTCCCTTCCGATACGTCTCGCCTGTAATGTGGGTGTAATCTTTTCATGCCTGGTAGAC AGTGTTGAACATAAGTCAATAGATGGACTGTTCAAATTCATCCGGTCATGCTAAAACCTTCCAAGCGCTGATCTAGCTGCTTGAAAAAGAAGGGAAAAAT
DNA Sequence for Gene
>AAY86_RS09610
ATGACGAAGTCGGAGTTGATCGAACGAATTGTCACCCATCAAGGGCTGCTCTCATCCAAGGATGTCGAGCTGGCCATCAAGACCATGCTTGAACAAATGT CCCAGTGCCTGGCGACCGGTGACCGAATTGAAATTCGGGGCTTTGGCAGCTTTTCGCTGCATTACCGTGCACCGCGAGTAGGGCGCAATCCGAAGACCGG TCAGTCGGTCAGCCTCGACGGCAAGTTTGTCCCGCATTTCAAGCCGGGCAAAGAGCTGCGGGATCGGGTCAATGAGGATGAAGAAGAGGGCTTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCCATTCACCACAGGATCATCAGATGCGTATCTTCAAACGAGTCATTTTGATCGTCGCCGTGTTGCTTGCTGTTTTGGCAACAGCCGTGTTCGTTCTTG AAAACCGGCAATCTGTCGCGGTAACTTTTTTCGGCTGGTCAGCGCCTCAGCTTCCGTTGGCATTGCCTGTTGTCCTCGCTCTGCTGCTGGGCATGATTAT CGGCCCGGTGCTGACATGGATAACCAGTCTTCGAAAAAAACGTGCGCCTTCCCCTCGCTCCGTCTGAGCATCACAGCAGCGCTGATCAGGCGTCGCCGCA GGCATTTCTGGCGACGTGATATGCGCATTCTCCACGCCCTTGCGCTCAATTGAATGCCATGCGGCGTTTTGAGGCTGGCGTGTAATTCATGTCTATAGTC GGTATTTTCAAAAAAAGCCGACTTATAATTCTGTCAGTTTATTCTTATGTTTTACGAGGAATAGTTACTTCGGTATGTAGGAATATTCTCTTTTTTAATT
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEEGF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site