Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS26435 (fadH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold13.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCTCGGGGAGTACTACCACCGTTCTGTGGTTGATCAGCCCGTAGTCGCGGGCCTGTTGCAGATAGGCGGCCAGCTTGCGGTGCAGTCGGTCAGTGTTC TGATAGTCCGTGGGGAACAGCTCCGGCTCGATGCCCAGCAGGTTTCCGCGTTCACTGGGCTCGCCTTCATTGATTGCCAGGCGAATGCGCAGATCGGACA GGTAGTGGCCCGCCGGACGTTGTCCGGTCCAGACTGCGTAACTGACAAGGCTGGCTACGCTCAGCAGGATCAGACAGATGGCGAAGAGTTTGCGCATAAA AAGGCCGGCTGGCTGCCATCAGGGAATTGTCGACTAGGGTAGGACGACGTCAGGCGCTTGCCAAGTGCCGCTGCGCGTTTGGATCAATAACTTGTCACTT TCGGTCATTGAGTGTGGGGCTGGATGCGTCTTTACTGTTGCCCATGAGAGGACCCGCAGAGGTCCTTGTTTTCCCGTGATTGACTCGATGGAGCTTCGCC
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| DNA Sequence for Gene |
>AAY86_RS26435
|fadH
ATGACTGCTGCTCATTACCCGCACCTGCTGGCCCCGCTGGACCTGGGCTTCACAACCTTGCGCAACCGGACCTTGATGGGCTCGATGCACACTGGTCTTG AAGAGCGGCCGGGTGGTTTCGAGCGCATGGCGGCTTATTTTGCCGAGCGGGCACGCGGCGGGGTCGGGTTGATGGTGACCGGCGGGATCGCGCCCAACGA AGAGGGTGGCGTCTACGACGGTGCGGCAAAACTCACCAATGCCGAAGAGGCGGAGCAGCATCGCATCGTTACCCGTGCGGTCCACGAGGCTGGCGGCAAG ATCTGCCTGCAGATCCTGCATGCCGGTCGCTACGCCTATAGCCGCAAGCAGGTTGCGCCGAGTGCTATCCAGGCCCCGATCAACCCTTTCACGCCGCGTG AGCTGGACGAAGAGGGCATCGAAAAGCAGATCGCTGATTTCGTGACCTGTTCCACGCTGGCCCGCAGTGCCGGGTATGACGGTGTCGAAATCATGGGTTC GGAAGGCTATTTCATCAATCAATTCCTCGCCGCACATACCAACCACCGCACCGATCGCTGGGGCGGCAGCTATGAAAACCGCATGCGCCTGGCGGTCGAG ATCGTTACGCGGGTGCGTGAGGCGGTCGGTGCGGATTTCATCATTATCTTTCGACTGTCGATGCTGGATCTTGTGGAGGGTGGTAGCACCTGGGAAGAGA TCGTCCAGCTGGCCAAGGCGGTCGAGCAGGCGGGTGCGACGCTGATCAACACCGGGATCGGTTGGCACGAGGCACGTATTCCGACCATCGCCACCAAGGT GCCGCGTGCAGCGTTCAGCAAGGTCACTGCCAAACTGCGAGGTTCGGTGAAGGTGCCGCTGATCACTACCAACCGCATCAATACCCCGGAAGTTGCCGAG CGCATCCTCAGCGAGGGCGACGCCGACATGGTCTCGATGGCTCGTCCTTTTCTGGCCGACCCGGAATTCGTCAACAAGGCTGCGGCGGGGCACGCCGAAC GGATCAACACCTGCATCGGCTGTAATCAGGCCTGCCTTGACCACACCTTCGGCGGCAAGCTCACCAGTTGCCTGGTCAACCCGCGCGCCTGTCACGAGAC CGAGCTCAACTACCTGCCCACCCGGCAGGTGAAGAAAATTGCCGTGGTGGGTGCCGGTCCTGCCGGTCTGGCTGCTGCAACCGTTGCTGCACAGCGCGGA CATGAGGTGACGGTGTTCGATTCGGCCAGCGAAATCGGTGGCCAGTTCAATATCGCCAAGCGCGTGCCGGGCAAGGAAGAGTTCTCCGAGACGCTGCGTT ACTTCCGCAACAAAGTGGAAGAAACCGGCGTGCAATTGCGCCTCGGCACTCGCATAAAAGCCGAAGACTTGCTGGGGGCCGGCTTTGACGAGGTGATTCT GGCAACCGGCATCGCACCGCGCACTCCTGCCATCCCAGGTATCGATAACCAAAAAGTGCTCAGCTATCTGGATGTCATTTTGCAGCGCAAGCCGGTCGGG CGCAGCGTGGCAGTGATCGGCGCAGGCGGTATCGGTTTCGATGTGTCGGAATTTCTCGTACACCAGGGCGTGGCCACCAGCCTGGATCGCGAGGCGTTCT GGAAAGAGTGGGGCATCGATACCATGCTTGAAGCGCGCGGCGGCGTGGCCGGGATCAAACCTGATGTGCACGCCCCGGCACGCCAGGTGTACCTGCTGCA ACGCAAGAGTTCCAAGGTGGGCGACGGCCTGGGCAAGACCACCGGCTGGATTCACCGCACCGGGCTGAAAAACAAGCAGGTGCAGATGCTAAACAGTGTC CAGTACCTGAAAATCGACGATGCCGGGTTGCATATTCGCATTGGTGAAGACGGCGAGGAAAAGCTGCTGGCGGTAGATAACATTGTGATTTGCGCCGGGC AGGACCCGCTGCGCGAGCTGTATGACGATCTGGTCAGCGCCGGGCAAAGCGTCCATCTGATCGGCGGTGCAGACGTTGCCGCCGAGTTGGATGCCAAACG CGCTATCGATCAGGGTTCGCGTCTGGCCGCTGCGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGAGCTTGTCTGTAAACTGCGCGGATGATTGTTGACGCCCTTGACTGGCAGCCCACTGCTGCGCTGCAACGCTTGAACCTGCCCTGGCTGCAAGATGCC GGGGTCGAGGTGGCGATCCTGCGCCTGGACCTTATTGACTCGCTCATCAGCGGCAACAAATGGTTCAAGCTCAGCGAACACCTGCCCCAGGCTGTAGAGG CGGGTGCAGAGGGATTGATCAGCCTGGGCGGCGCACACTCCAATCATCTCCATGCTCTGGCAGCAGCGGGCAGGCGCTTCGGTTTCCCGACGGTGGGCCT GTTGCGTGGTCACGCCCAGCAGACGCCGACGGTACTGGACCTGCAAGCTTTTGGCATGCAATTGCACTGGTTGGGCTATGCGGGTTATCGAGCACGACAT GCTGCGGATTTCTGGCTGCCCTGGCAGGCGCAATATCCTGAGCTGTATCCGATTGCCGAAGGCGGTGGCGGGCTTGCCGGTGCGCTGGGCTGCGCAAGGT
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| Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MTAAHYPHLLAPLDLGFTTLRNRTLMGSMHTGLEERPGGFERMAAYFAERARGGVGLMVTGGIAPNEEGGVYDGAAKLTNAEEAEQHRIVTRAVHEAGGK ICLQILHAGRYAYSRKQVAPSAIQAPINPFTPRELDEEGIEKQIADFVTCSTLARSAGYDGVEIMGSEGYFINQFLAAHTNHRTDRWGGSYENRMRLAVE IVTRVREAVGADFIIIFRLSMLDLVEGGSTWEEIVQLAKAVEQAGATLINTGIGWHEARIPTIATKVPRAAFSKVTAKLRGSVKVPLITTNRINTPEVAE RILSEGDADMVSMARPFLADPEFVNKAAAGHAERINTCIGCNQACLDHTFGGKLTSCLVNPRACHETELNYLPTRQVKKIAVVGAGPAGLAAATVAAQRG HEVTVFDSASEIGGQFNIAKRVPGKEEFSETLRYFRNKVEETGVQLRLGTRIKAEDLLGAGFDEVILATGIAPRTPAIPGIDNQKVLSYLDVILQRKPVG RSVAVIGAGGIGFDVSEFLVHQGVATSLDREAFWKEWGIDTMLEARGGVAGIKPDVHAPARQVYLLQRKSSKVGDGLGKTTGWIHRTGLKNKQVQMLNSV QYLKIDDAGLHIRIGEDGEEKLLAVDNIVICAGQDPLRELYDDLVSAGQSVHLIGGADVAAELDAKRAIDQGSRLAAAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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