Pseudomonas alkylphenolia KL28, PSAKL28_RS25680
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas alkylphenolia strain KL28, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCGCCCCTCGCCTTTGCGCAACAGGGTGCCGACCCGCTCTTTCATCTCCCGTGCGGCCTTGTTGGTGAAGGTCATGGCCACGATGTACTGCGCACGGA TGCCGCAATTCTGGATCAGGTGCGCGATTTTGCGGGTGATCACGCTGGTCTTGCCGGAACCGGCACCGGCGAGCACCAAAAGAGGGCCGCCGACGTAGTT CACGGCTTCTTGTTGCCGGGGATTGAGTCGGGACATGACGAAAACCGGGGTCGCTAGAAAAATAGCCGCGCATTTTAGCAGGGGTGGAGAGATTCTGCCG CGACCGTCTGACAGTGTGACGTACCACGCGATCTAAATTTGCCGCTTTTGTTACTTTCCCGCAGGATGCGTGGCGAAACCTGCGGGATGTCGGCAATGGA ATGGCTCGATGTTAAGTGAAAATCATTTTCACTAATGGTTTAGGATGAGCCTCTCGCTGCCCATTGTCATTTGACTGTGTCCACGTCCTAAGGAGCCAGC
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| DNA Sequence for Gene |
>PSAKL28_RS25680
TTGTCTACGCCTGTCGAACCCTTGCGTTTGCTCTTGCTGGCTGACGAGCCCGAATGGGCCGCCGCCTTGCGTGATTGCCTGACGCCGTTGGCGGGCAGTG CGGTGCTGTTGACCGCACCGAACTGGGACGCAGTCGACAGCCTGTTTGCCAATGACCGCAATGCCCTGGTGCTGGCCACCCCGCAACTGCAGCCAGCGCC TGGCCGCTGCATCTTGCCGATGGTGTTGCTGCTTGAGCATGAACCGCAGGTGCCACCGCCGGGTGTCAGCGACTGGCTGGTACTTGACCAGCTCGGCCCC GATACCTTGCGCCGCAGCCTGCGCCATGTGCGCGAGCGCGGAGTGCTGGAGGCCACCCTGATGCGCCTGGCCGAACAGGATCCGCTGACCGGTATCGCCA ACCGCCAGGGCTTTCAGACCCTGCTGGCCGCACGCCTGGCCGACAATGACGGGCGTGGGGTGGCCCTCGGTCACCTGGACCTGGATAACTTTCGCCGGGC CAACGATGCGCTTGGCCATCAGGCCGGTGACCGGTTGATCCTGCAGGTGGTCGGGCGCCTGAAAAGCCAGCTTGAGGCCGGCGACCAGGTGGCCCGTCTG GGTAGCGATGAATTCGCTCTGCTGATCGACACGCGCCGCGAGCCACAACGCGCTGAATGGATGGCTGAACGTATTACCGAGGCCCTGGCCGAACCCTACT GGGTCGATGGCGAGAGCCTGTTGATCGGCTGCAGCCTGGGTGTCGCCCATGCCCGTGCCCAAGGCGGTGCGGACCCGCTGATGTGGCACGCGCACATTGC CATGCAACAGGCCAAGGGTACTCAGGGCTGCACCTTCCATGTCTTCAACGAACGCATCAACCGCAACGCGCGCAGCCTCGCCGATCTGGAAAGCGAGTTA CGCCGCGCCTTGCGTCGCGACGAACTGGAGTTGCACTACCAGCCACGCCTGGACATGGCCGACGGACGTATTGTCGGCCTGGAGGCACTGGTGCGCTGGC GTCACGCCGAGCGCGGTTTGCTGCCGCCCAGCGAGTTTGTCCCGCTGGCCGAGCAGAGCGGGTTGATCGTGCCGTTGGGCTACTGGGTGATTTCCCGCGC CTTGCGCGACATGCAGGCACTGCGTGAACAGGGCCTGGAGCCGCTGCACATGGCGGTGAACCTGTCGTTCCGCCAGTTTCAGGACAGTCAACTGCTGGCC ACCTTGAGCCGCTTGATCATCGAGCATGGCGTCGATGCCCGCTGGCTGGAGTTCGAGCTCACCGAAACCGCGGTGATGCGCCGCAACGATCTGGTCGAGA AGACCATGGACGCCCTGGGTCGCCTGGGGGTGCGGTTTTCTCTCGATGACTTCGGTACCGGTTTTTCCTCCTTCGTCCACCTCAACAGCCTGCCGATCAC CTTGCTCAAGGTCGATCGCAGCTTTGTCGGTGGCATGGAAAAGCGTGAAGAGAACCGCAAGCTGGTCCACGCCATGATCAACCTGGCGCACAACCTCAAC CTGGAGGTGGTGGCTGAAGGGGTGGAAACGCCGGAGCAGATGGACCTGCTGCGCAGCTTCAACTGTGATCAGGTACAGGGTTTCCTGATCAGTCGGCCGC TGCCGGTTGATGAGTTGATAGTGTTTTTGCAGAGCGGGTCGGCGCAGCGGTCGGTGGCTTTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAAGTCATCGCGGGGCAAGCCCGCTCCCACAGAGATAAGCTGCCCTGTGGGAGCGGGCTTGCCCCGCGAAAAGTCCTTCAAATCACCGAAATAGTGGCCT TGTTCACACCACCTGAGTTACCCAGCAAGCGCTTCATCCGCCACTCGAACGCCAGCGTCAGGGTCACCGCCGCACACGCCAGGCCCAGTGCCAGACCCCA CCAGACGCCAACTGCGCCCATGCCCAAGGTGAAGGCCAGCAGCCAGGCCGCCGGGGCGCCGATCACCCAGTAGCAGAACAGCCCGACCAGGAAAGTGGTC TTGGCATCCTTGAGCCCGCGAATCGAGCCCATGGCGATGGTCTGCACGCCGTCAAACAGCTCGAACCACGCCGCGACCATCAACAGGCTCACCGCCAACT GGATGATGTCGGCAAAGGCCGGGTCATCGTGGTCGAGGAACAGCCCTACCAGCGGGTCCGGCAGCAGCCAGAACAGGATGGCGAACATCAGCATCATCGC
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| Amino Acid Sequence |
>diguanylate cyclase
MSTPVEPLRLLLLADEPEWAAALRDCLTPLAGSAVLLTAPNWDAVDSLFANDRNALVLATPQLQPAPGRCILPMVLLLEHEPQVPPPGVSDWLVLDQLGP DTLRRSLRHVRERGVLEATLMRLAEQDPLTGIANRQGFQTLLAARLADNDGRGVALGHLDLDNFRRANDALGHQAGDRLILQVVGRLKSQLEAGDQVARL GSDEFALLIDTRREPQRAEWMAERITEALAEPYWVDGESLLIGCSLGVAHARAQGGADPLMWHAHIAMQQAKGTQGCTFHVFNERINRNARSLADLESEL RRALRRDELELHYQPRLDMADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQSGLIVPLGYWVISRALRDMQALREQGLEPLHMAVNLSFRQFQDSQLLA TLSRLIIEHGVDARWLEFELTETAVMRRNDLVEKTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVDRSFVGGMEKREENRKLVHAMINLAHNLN LEVVAEGVETPEQMDLLRSFNCDQVQGFLISRPLPVDELIVFLQSGSAQRSVAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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