Strain | Pseudomonas alkylphenolia strain KL28, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCAGTTGGCTACTGGAACATCGGCCCCGAGAGCTTTCTCGACAAGCCGGTGGTCAGCGTCGACAACAACGCTATCGACTATTACGCCACCAATGCCCAC AGCGTACAGTTCCTGCCAGACGGCAAGATGCAGTACGAGATGACCGCCGACAAGGTCGAACACCTCAAGGTCAGCGAAGTGACCCTGCTGACCAAGCCGG ACCTGCAACTGTACCGTGGCACCACCTACCCCTGGCACGTGCAGAGCGAAAAGGGCGAGGTCAATCCGGATGGCTCGGAAGTGGAATTGATTGACTCGGT ACGGGTTGCCCGCACCGATGAAAAGAACCGCACCATGATCATTACCACCAGCCGCATGACGGTATTCCCGCAGAAGCAATATGCGCAAACCGCACAAGCC GTTAAAATCGACGGCGCCGGTGGCGTCACTACGGGCAATGGAATGAAAGCGTATTTGAAAGACGGCAGGATGGACCTGCTGTCCAACGTAAGAGGACAGT
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DNA Sequence for Gene |
>PSAKL28_RS21515
ATGAGGCTCGTTAAAACCCTCCCCTTTTTGCTCAGCCTGAGCGCAGCACTGGGAAGCGCGAGCGCCTGGGCCCTGCCGAACGACCGTGACCAGCCTATCC GCATTCAGGCCGACAACGCGCACCTGGATGACAAGAAAGGGGTCGCCACCTATACCGGCGACGTCATCATCACCCAAGGCTCGATGATGATCAAAGGCAA CACCGTGACCATCACCCGCGCCGCCTCCGGCGACATCGATGTGGTGACCTCGGTGGGCAACCTGGCCTACTTCGAGCAGCAACAGAGCGCTGCCAAGCCG GACAAGATGCAAGGCTACGCCGTGACCATCCAGTACCAGGCGCAAAAAGACCTGGTGGTGCTGACCGACCGCGCCAAAGTGGTCAACGAAGGCAATACCA CCGAAGGCGAGAAGATCGTCTACAACACCAAGACCCAGGTAGCGACTGCCGGTCGTGGCGGCAATGTGACCACACCGCGCCAGCGTATCGACATGGTGAT CCAGCCTAAGAAGAAGGCCGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGGCGACCCTCAAAGCCCAGCACCTGGCCAAGAGCTACAAGAGCCGACAAGTGGTCCGCGACGTCAGCCTGTCGATCGACAGCGGCCAGATCGTCGGCC TGCTCGGCCCTAACGGCGCCGGCAAAACCACCTGCTTCTACATGATCGTCGGCCTGGTCCAGGCCGATCAGGGCCGTGTCCTGATCGACGACCTGGATGT CAGCCACCAGCCGATGCACGGCCGTGCCCGTGCCGGTATTGGTTACCTGCCCCAGGAAGCCTCGATCTTTCGCAAGCTTTCGGTTGCCGACAACATCATG GCGATCCTCGAGACCCGCAAGGACCTCGACACCGCCGGACGTCGCAAGGAACTGGAAAGCCTGCTGCAGGAATTTCACATCAGCCACATTCGCGACAACC TCGGCATGAGCCTGTCCGGCGGCGAACGTCGCCGCGTGGAGATTGCTCGGGCCCTGGCCACCGCACCGAAATTCATCCTGCTCGACGAACCCTTTGCCGG
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Amino Acid Sequence |
>organic solvent tolerance protein OstA
MRLVKTLPFLLSLSAALGSASAWALPNDRDQPIRIQADNAHLDDKKGVATYTGDVIITQGSMMIKGNTVTITRAASGDIDVVTSVGNLAYFEQQQSAAKP DKMQGYAVTIQYQAQKDLVVLTDRAKVVNEGNTTEGEKIVYNTKTQVATAGRGGNVTTPRQRIDMVIQPKKKAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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