Strain | Pseudomonas alkylphenolia strain KL28, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTTCGAAGATCGTCATCAAGGTGCCGCTGACCCTGGCGATCATGCCGACCCTGATGGTCATGCTGGGCAATCAGGCGTTCGCCTTCCCGCTGGTCAACGT CAACGAGATCTTCCACCTGGATCTGTCGCGCACCAACGTGGTCGACGGCCAGGAGGTGGTCATCGTTCGCGACAAAGCCTTGCCGCTGTTCTACCTCAAG CGCTGGCTGGTCAGTTCCGCCGCTCATGAAGAGCAACGCGAAGGGCACGTGGTGATCCTTTCGGTCGGCACCCAGCGGATCGGCTTCGTCGTCGATCAGT TGGTCGGCCAGGAAGAAGTGGTCATCAAACCGCTGGGCAAGATGCTCCAGGGCACGCCGGGCATGTCGGGCGCCACCATTACCGGTGACGGGCGCATCGC GCTGATCCTCGACGTTCCGAGCATGCTCAAGCGTTACGCCGCCCGGCGTATTTGATTCTGGTGGCGCGGCCCGCACGCCGCGCCCCCTAATGGAGTGTTT
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DNA Sequence for Gene |
>PSAKL28_RS18735
ATGGCAGTCAAGGTCCTGGTGGTGGATGATTCCGGTTTCTTCCGCCGCCGAGTCTCGGAAATTCTTTCAGCGGACCCGACTATCCAGGTCGTCGGTACCG CGACCAACGGCAAGGAAGCGATCGACCAGGCACTGTCGCTCAAGCCCGATGTCATCACCATGGACTACGAAATGCCCATGATGGATGGCATCACCGCTGT ACGTCACATCATGCAGCGCTGTCCGACCCCGGTGTTGATGTTCTCCTCGCTGACCCACGAAGGCGCGCGGGTGACCCTCGATGCCCTGGATGCCGGTGCT GTCGATTACCTGCCGAAAAACTTCGAAGACATCTCGCGCAACCCGGAGAAGGTCAAGCAGTTGCTGTGTGAAAAGGTCCATACCATTTCCCGCAGTAACC GCCGATCAATCAGCTATGCCGCGCCAGTGCCGCAACCGGCCAGCCATACCCAGCCGAGCGTCAGCAGCCTGGGCAGCAGCCCGGCACCACGGGCTGCGGC ACCGGTACGGGCGGCGGCTTCTGCTGCCTCGCCTGCACCCAAGCGCAAGCCTTACAAACTGGTGGCCATCGGTACCTCCACCGGCGGCCCGGTGGCGCTG CAGCGGGTATTGACCCAGCTGCCAGCCAATTTTCCGGCACCGATCGTGCTGATCCAGCATATGCCCGCTGCTTTCACCAAGGCATTTGCCGAGCGCCTCG ACAAACTGTGCAAGATCAGCGTCAAGGAAGCCGAAGACGGCGACATGCTGCGTCCCGGCCTGGCCTTGCTGGCCCCGGGGGGCAAGCAGATGATGATCGA CGGCCGCGGTGCGGTGAAGATCCTGCCGGGTGACGAGCGCCTGAACTACAAGCCGTGTGTGGATATCACCTTCGGCTCGGCGGCCAAATCCTACGGCGAC AAGGTGCTGTCGGTGGTGCTCACCGGCATGGGCGCCGATGGCCGCGAAGGTGCGCGCCTGCTCAAGCAGGGCGGCAGCACGGTCTGGGCCCAGGATGAAG CCAGCTGCGTGATCTACGGCATGCCCATGGCCATCGTCAAAGCCAACCTGGCCGACGCGGTGTATAGCCTGGACGAGATCGGCAAGCACTTGGTCGAGGC GTGCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGGATGTCTTGAGCCTTATCGGGATCATCCTGGCGTTTGTCGCGATTGTCGGCGGCAATTACCTCGAGGGTGGTCACCTCTCGGCGCTGATCAACGGCCC TGCGGCCTTGATCGTGCTCGGCGGCACCTTGGCTGCGGCGCTGCTGCAGTCACCCATGAGCGCCTTCAAGCGGGCGCTGCAGATCGTGCGCTGGATTCTT TTTCCGCCGCGTATCGACCTGGCTGGCGGTATCGACCGGGTGGTCAACTGGAGCATGACCGCACGCAAGGAAGGCCTGCTGGGCCTGGAAGGCGTGGCCG ATGCCGAGCCCGATCCTTACGCGCGTAAGGGCTTGCAGCTGCTGGTCGACGGTGCCGAGCCTGAAGCCATCCGCAGCATCCTCGAAGTGGATTTCTACAC CCAGGAAAGCCGCGACATCCAGGCTGCCAAGGTGTTCGAGTGCATGGGCGGCTATGCGCCGACCATCGGTATCATCGGTGCGGTCATGGGCCTGATTCAT
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Amino Acid Sequence |
>chemotaxis protein CheY
MAVKVLVVDDSGFFRRRVSEILSADPTIQVVGTATNGKEAIDQALSLKPDVITMDYEMPMMDGITAVRHIMQRCPTPVLMFSSLTHEGARVTLDALDAGA VDYLPKNFEDISRNPEKVKQLLCEKVHTISRSNRRSISYAAPVPQPASHTQPSVSSLGSSPAPRAAAPVRAAASAASPAPKRKPYKLVAIGTSTGGPVAL QRVLTQLPANFPAPIVLIQHMPAAFTKAFAERLDKLCKISVKEAEDGDMLRPGLALLAPGGKQMMIDGRGAVKILPGDERLNYKPCVDITFGSAAKSYGD KVLSVVLTGMGADGREGARLLKQGGSTVWAQDEASCVIYGMPMAIVKANLADAVYSLDEIGKHLVEACV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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