Pseudomonas alkylphenolia KL28, PSAKL28_RS17880

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF08352	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00382	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000166	nucleotide binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF08352	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0015833	peptide transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PF08352	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	palk02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.40.50.300:FF:000016	Oligopeptide ABC transporter ATP-binding component	-	-	272	537	7.0E-101
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	6	257	4.55E-68
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	4	271	2.6E-82
Pfam	PF08352	Oligopeptide/dipeptide transporter, C-terminal region	IPR013563	Oligopeptide/dipeptide ABC transporter, C-terminal	237	266	1.4E-5
Pfam	PF00005	ABC transporter	IPR003439	ABC transporter-like, ATP-binding domain	303	453	1.0E-29
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	311	502	1.6E-17
CDD	cd03257	ABC_NikE_OppD_transporters	-	-	6	240	4.72009E-112
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	273	533	2.2E-81
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	275	524	7.83E-66
Pfam	PF08352	Oligopeptide/dipeptide transporter, C-terminal region	IPR013563	Oligopeptide/dipeptide ABC transporter, C-terminal	504	528	0.001
CDD	cd03257	ABC_NikE_OppD_transporters	-	-	275	507	1.59188E-106
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	35	235	1.0E-14
FunFam	G3DSA:3.40.50.300:FF:000016	Oligopeptide ABC transporter ATP-binding component	-	-	3	270	5.9E-112
Pfam	PF00005	ABC transporter	IPR003439	ABC transporter-like, ATP-binding domain	27	185	3.4E-29
PANTHER	PTHR43776	TRANSPORT ATP-BINDING PROTEIN	-	-	271	528	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.