Pseudomonas alkylphenolia KL28, PSAKL28_RS11840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alkylphenolia strain KL28, complete genome. [Details]
DNA Sequence Upstream of Gene
CGTGCCGGTGAGCTGCAACAGGTCGGTCAGGATCAGGCCGGCGCCACCTTGATCCAGGACGACGGCACGCCCTACCCGTTGCCGGGCAAGCTGCTGTTCT CCGACATCAGTGTCGACCCGAGCACCGGGCAGATCACCTTGCGCAGCGAGTTCCCCAACCCCGACCTCGACCTGCTGCCGGGCAGTTTCATTCGCGTACG CCTGGAACAAGCGATCAAACAGCAAGGCATCAGCGTGCCGCAGCGCGCCATCCTGCGGGACAGCGCCGGCAATCCGCGGGTGTTACTGGTCGATGCCCAG CAGCGCATCAGCGAGCGCCCGGTGGTGCTCGGCGGCGTGCAACACGACCGCTGGATCGTCAGCGCCGGCCTGGCCCCCGGTGACCGGGTGGTGGTCGAAG GCCTGCAGCACGTCAATCCAGGCGACCAGGTACAGGTCGACAACGCGGGCAAGGACGCCCCTTCCATCGTTCAGACCACCGGCCAGTGAGGGCCTGATTC
DNA Sequence for Gene
>PSAKL28_RS11840
ATGCCGCAGTTTTTCATTGATCGCCCGGTATTCGCCTGGGTGGTCGCGCTGTTCATCCTGCTGGCCGGTGCCCTGGCGATTCCGCAGTTGCCGGTCGCCC AGTACCCCGACGTGGCGCCACCGCAGGTAGAAATCTATGCCGTCTATCCGGGTGCTTCGGCGCAGACCATCGACGAAAGCGTGGTCAGCCTGATCGAAGA GGAGCTCAACGGCGCCGACAACCTGCTCTACTTCAGCTCGCAAAGCAGCCTGGGCAGCGCCACCATTACCGCCACCTTCGAACCGGGCACCAACCCGGAC CTGGCCCAGGTCGATGTGCAGAACCGCCTGAAAGTGGTCGAGTCGCGCCTGCCACGGCCGGTTACCCAGCAGGGCCTGCAGGTGGAAAAGGTGTCCACCG GCTTCCTGTTGCTGGTGACCCTCACCGCCGAGGACGGCAGTCTCGATGAAGTGACCTTGAGCGATTTTCTGGCGCGCAACGTGATGAACGAGATCCGCCG CCTCAAGGGCGTCGGCAAGGCCCAGCTGTATGGCTCGGAACGGGCCATGCGGATCTGGCTCGACCCGCAGAAGCTGATCGGTTTCAACCTCACCCCGGAT GATGTCAACGAGGCGATTGCCGCCCAGAACGCCCAGGTCGCGCCAGGCAGCATCGGCGATCTGCCCACCACCGGCAGCCAGGAAATCACCGCCAACGTGG TGATCAAGGGCCAACTGAGTACGGTGCAGGAGTTCGAAGACATTGTCTTGCGTGCCAATCCGGACGGTTCGCGCTTGACCATTGGCGATGTCGCCCGGGT CGAGATCGGCAGCCAGGAGTATCAATACGGTACCCGCCTGAACGGCAAGCCCACCAGTGCCTTCAGCGTGCAACTGTCGCCCGGCGCCAACGCCATGGAA ACCGCGACCCTGGTGCAGGGCAAGCTTGCCGAGCTGTCGCGTTACCTGCCAGCGGGCGCCAAGTTTGATATCCCTTATGACACCTCGCCGTTCGTCAAGG TGTCGATCCAGCAAGTGATCACTACTCTGCTCGAAGCCATGGCCCTGGTGTTTGCAGTGATGTTCCTGTTCCTGCAGAACATCCGCTATACCCTGATCCC GACCCTGGTGGTGCCGGTGGCGCTGATGGGCACCTTCGCGGTGATGATGCTGCTGGGCTTCTCGGTCAACGTGCTGACCCTGTTCGGCATGGTCCTGGCC ATCGGCATCCTGGTGGACGACGCCATTGTCGTGGTGGAGAACGTCGAGCGGATCATGAGCGAAGAAGGCCTGGCGCCGCGCGAAGCGACGAAAAAAGCCA TGGGCCAGATCAGCGGCGCGATTGTCGGCATTACCCTGGTGCTGGTGGCGGTGTTCCTGCCCATGGCCTTCATGAGCGGCTCGGTGGGAGTTATCTACCA GCAGTTTTCGGTGTCGATGGCGGTGTCGATCCTGTTCTCGGCGTTCCTCGCCCTGAGCCTGACCCCGGCCCTGTGCGCCACGCTGCTCAAACCCATCGCC AAGGGCGAGCACCACGAAAAACGCGGGTTCTTTGGCTGGTTCAACCGTCGCTTCGAAAACCTCAGCAATGGCTACCAGCGTTGGGTGATCCTGGCCCTCA AGCGCAGCGGCCGCTATCTGATGGTGTACCTGGTGCTGGTGGCGGGCCTGGTCTACGGCTTCAGCCAGTTGCCCTCCTCGTTCCTGCCCACCGAAGACCA GGGCTATACCATCACCGACATCCAGCTGCCGCCAGGCGCCAGCCGGGCGCGTACCGAAGCGGTGGCGGCGCAGATCGAGGCGCACAACGCCACAGAACCA GGAGTTGGCAACAGCACGCTGATTCTCGGCTTCAGCTTCTCCGGCAACGGTCAGAACGCGGCGCTGGGCTTTACCACGCTCAAGGACTGGTCCGAGCGCG GTGCCGACGACAGTGCCCAGTCGATTGCCGACCGCGCCAATGCGGCCTTCAGCCAGCTCAAGGACGCCATTGCCTATTCCGTGCTACCACCACCGGTGGA CGGCCTGGGTACCTCCAGCGGTTTCGAGTTCCGCCTGCAGGACCGTGGCGGCCTCGGCCATGCGGCGCTGATGGCGGCACGCGACCAGCTGCTGGCCAAT GCCGAAAAGAGCCCGGTGCTGGTCAACGTGCGTGAAAGCGCCCTGGCCGAAAGCCCGCAGGTTCAGCTCGAAGTCGACCGCAAGCAGGCCAACGCCCTGG GCGTGTCCTTTGCCGATATCGGCAATGTGCTCAATACCGCAGTGGGCTCCAATTACGTCAATGACTTCCCCAACCAGGGGCGCATGCAGCGCGTGGTGGT GCAAGCCGAAGGCGACCAGCGCGCCCAGGTCGAAGATCTGCTGAAGATTCATGTGCGCAACAACAGCGGCAAGATGGTCCCACTGTCCGCCTTTGTCCAG GCCAAGTGGATCACCGGCCCGGTACAACTGACGCGCTACAACGGTTACCCGGCGATTGCGGTGTCGGGTGAACCGGCACCGGGCTTCAGCTCGGGCCAGG CGATGGACGAGATCCAGCGCCTGGTCGATCAGTTGCCGCTGGGAATGGGCCTGGAGTGGACCGGGCTGTCGCTGCAGGAACGCTTGTCTGGCGCCCAGGC GCCGATGCTCATGGCACTGTCGCTGGTGGTGGTGTTCCTGTGCCTGGCGGCGCTGTATGAAAGCTGGTCGATTCCGACCTCGGTACTGCTGGTGGTGCCA TTGGGTGTGCTCGGTGCGGTGATAGCCGTAAGCTTGCGCGGCATGCCTAACGACGTGTTCTTCAAAGTCGGCTTGATCACCCTGATCGGCCTGTCGGCAA AGAACGCCATCCTGATCATCGAGTTTGCCAAGAGCCTGGTCGATGACGGCCATGACTTGGTGGAAGCAACGGTACAGGCAGCGCGCCTGCGCCTGCGGCC GATTGTCATGACTTCGCTGGCGTTCATCCTCGGCGTAGTACCGCTGGCGATTGCCAGCGGCGCCAGCTCGGCCAGCCAGCAAGCGATCGGCACCGGGGTG ATCGGCGGCATGCTCAGTGCCACGCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTCGTGGTCATGCGCCTGACCGGCAAGCGCCGGACGCCGGCACAAC AGCCACAGGCCGCGCTCGAAGAGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCTGGACAGTTGACGGCGTGCATGGGAAGGTAAGCGGCTGACACTGCCAGGAACCCTACCCATGCCCGCCGCCACTCCCCCCTGCTCCATTCTTCTGCTG GCCGGCGGTCGCGGCCAGCGCATGGGCGGCCAGGACAAGGGCCTGCTGCCCTGGCAGGGCAAGCCACTGATTGCCCATATCCAGGCGGTCGTGCGGCCAC TGACCGATGACCTGATCATTTCCTGCAACCGCAACCAGGACCAGTACAGGCCCTTTGCCGATCAACTGGTCAGTGACGCCCAGACCGACTTCCCCGGGCC GCTGGCCGGCGTGCTGGCGGGGCTTGCAGTGGCACGCCATCCCTGGATGCTGGTGCTGGCTTGTGATGCCCCATTGATCGACAGCGCGCTGATTGTTGAT CTGCTCAGCCAGGCCAATGACCAGGGGCAACCGGCAATGATTCGCCAGGGAGGCTACTGGCAGCCAATGTTCAGCCTGATTCCCTGCACCTTGCGCGATG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPDVAPPQVEIYAVYPGASAQTIDESVVSLIEEELNGADNLLYFSSQSSLGSATITATFEPGTNPD LAQVDVQNRLKVVESRLPRPVTQQGLQVEKVSTGFLLLVTLTAEDGSLDEVTLSDFLARNVMNEIRRLKGVGKAQLYGSERAMRIWLDPQKLIGFNLTPD DVNEAIAAQNAQVAPGSIGDLPTTGSQEITANVVIKGQLSTVQEFEDIVLRANPDGSRLTIGDVARVEIGSQEYQYGTRLNGKPTSAFSVQLSPGANAME TATLVQGKLAELSRYLPAGAKFDIPYDTSPFVKVSIQQVITTLLEAMALVFAVMFLFLQNIRYTLIPTLVVPVALMGTFAVMMLLGFSVNVLTLFGMVLA IGILVDDAIVVVENVERIMSEEGLAPREATKKAMGQISGAIVGITLVLVAVFLPMAFMSGSVGVIYQQFSVSMAVSILFSAFLALSLTPALCATLLKPIA KGEHHEKRGFFGWFNRRFENLSNGYQRWVILALKRSGRYLMVYLVLVAGLVYGFSQLPSSFLPTEDQGYTITDIQLPPGASRARTEAVAAQIEAHNATEP GVGNSTLILGFSFSGNGQNAALGFTTLKDWSERGADDSAQSIADRANAAFSQLKDAIAYSVLPPPVDGLGTSSGFEFRLQDRGGLGHAALMAARDQLLAN AEKSPVLVNVRESALAESPQVQLEVDRKQANALGVSFADIGNVLNTAVGSNYVNDFPNQGRMQRVVVQAEGDQRAQVEDLLKIHVRNNSGKMVPLSAFVQ AKWITGPVQLTRYNGYPAIAVSGEPAPGFSSGQAMDEIQRLVDQLPLGMGLEWTGLSLQERLSGAQAPMLMALSLVVVFLCLAALYESWSIPTSVLLVVP LGVLGAVIAVSLRGMPNDVFFKVGLITLIGLSAKNAILIIEFAKSLVDDGHDLVEATVQAARLRLRPIVMTSLAFILGVVPLAIASGASSASQQAIGTGV IGGMLSATLAVVFVPVFFVVVMRLTGKRRTPAQQPQAALEEH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site