Pseudomonas alkylphenolia KL28, PSAKL28_RS10750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alkylphenolia strain KL28, complete genome. [Details]
DNA Sequence Upstream of Gene
ACCCGGCCACCCGCAGCTGGATCAGCGCCCATGTCATGCCTCATCTGCAAGACGCCAGCGCGCCGCGCAAGGTCGAAACAACCGCCGGCCTGCCGGCCTG GGAAGAAGCCCTCGAGCAGGTAGTGCCGATCCTGCACAAGGACGGCCTCAAGGCTGCCGTGCAGATCCTCAAGCAAGGCCTGCAACACGCCCACGGCGGG CGGGCGCGGTTTTTCTGGCAATTCAGCCTGGCGCGTCTGTGTTTCATGGCCAAGAAATATGAACTGGTCAAAACCCAGCTCGAAGCCCTCGATCAAGAAC TGCAGCACTCGGGCCTGCACGCCTGGGAGCCGGATCTTGGCCTGGAAGTGCTGCACCTGCTGCATAGCTGCTGTGAGTTGTTGCCGCAGAACCATGCGGT GCGAGAACGCAAAGAAGAGATTTATCGCAGGCTGTGCCACCTCGATCTTGAAGTGGTACTCGAATAGGCCTCAGGGCCAACAACCGCAAGGAGAAAAGCC
DNA Sequence for Gene
>PSAKL28_RS10750
ATGGCCAAAGAAGGCTCGGTAGCCCCCAAGGAACGCATCAACGTCACCTTCAAACCCGCCACCGGTGGGGCTCAGGAAGAAATTGAACTGCCGTTGAAGC TACTGGCAATCGGCGATTACACGCAGCGCCTGGACGAGCGCAAGGTGGAGGATCGCAAGCCGATCAGCATCGACAAAATGACCTTCGACGAAGTCCTGGC CAAGCAGGAGCTGAGCCTGACGCTGAGCGTACCTAACCGCCTTCAGGACGACAGCGACAGCGAAGAGCTGGCGGTTCAGCTGCGTGTCAACTCGATGAAG GACTTCAACCCAGCCAGCTTGGTCGAGCAAGTGCCTGAGCTGAAAAAACTGATGGAACTGCGCGACGCGCTGGTGGCGCTAAAAGGTCCGTTGGGTAACG CCCCTGCATTCCGAAAAGCCATCGAAGGTGTACTCGCCGACGACGAATCGCGCGGTCGTGTGCTCGGTGAGCTGGGCCTGAACGCCGAAGCCCCGAAAGC CTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCAGTCAAGGAAGCCAACACCATGAGTACCAGTGCAGCACAACAGAAAAGTAACGACAACGGCGAGTACAGCATTCTCGACAGCATTATCGCCGAAACC CGCCTGACGCCGGACGATGAAGCCTATGACATCGCCAAACGTGGTGTCTCGGCTTTTATCGAAGAACTGCTGAAGCCGCAGAATGACGGTGAGCCGGTCA AGAAGGCCATGGTTGATCGCATGATCGCCGAGATCGATGCCAAGCTCAGCCGCCAGATGGACGAAATCCTTCACCACGAAGACTTCCAGTCCCTGGAGTC GGCTTGGCGTGGTCTGCAATTGCTGGTGGAGCGCACCAACTTTCGCGAAAACATCAAGATCGAGATCCTCAACGTCTCCAAGCAGGACCTGCTGGACGAT TTCGAAGATTCGCCGGAAGTAATGCAGGCCGGCCTGTACAAGCACATCTACACCGCTGAATACGGTCAGTTCGGTGGCCAGCCGGTCGGCGCGATCATCG
Amino Acid Sequence
>type VI secretion protein
MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTQRLDERKVEDRKPISIDKMTFDEVLAKQELSLTLSVPNRLQDDSDSEELAVQLRVNSMK DFNPASLVEQVPELKKLMELRDALVALKGPLGNAPAFRKAIEGVLADDESRGRVLGELGLNAEAPKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site