Strain | Pseudomonas alkylphenolia strain KL28, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCCTGGCCGGCGGCAATCAGGCTGGATTGTTGGGTCAGGCGGCTTTCGGCTTGCAGGCGCTCGGCTTCACGGGTGGCGAGGGCGGCGCGGGCGCGTTCCA CGGCCAGGCGGAAATCGTCCGCCTCAAGGCGTACCAGCAGATCGCCCTTGGCCACATGCTGGTTGTCCTGAACCAGTACTTCATCGATGCGCGCGCTGAG CTGGCTGGAAACCCGGGTGATTTCACCCTGTACATAAGCATTGTCGGTGCTCTCGTAGAAGCGTCCTTTGACATACCAGTGGGCGAAAAAGGCGAGGGCG ATGAACAGAACCAGGGTCAGGAAAACCAGCAGGCGGCGTTTGAGTTGAGCGGGCATGGGGTACTATCGTTCCAAAAATGTAAGCAAATTTAACCGTGTTT GGATCCGCCACCACAAGTGCTGATCGCGCCCATTGCTGGAGCCCGGTGCCTGCTCCCTGTTAACATCCAGCCTTTGATTCATCTCTAGTTCGAGACTCTC
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DNA Sequence for Gene |
>PSAKL28_RS07720
ATGACCACCGTTCGCACGCGTATCGCGCCTTCGCCTACTGGCGATCCCCACGTCGGCACCGCCTACATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGC ACGGCGGCGAGTTCATCTTGCGTATTGAAGATACCGACCAGCTGCGTTCGACCCGCGAGTCCGAACAGCAGATCTTCGACGCCCTGCGCTGGCTCGGTAT CGAGTGGAGCGAAGGTCCGGACGTCGGTGGCCCGCATGGCCCGTACCGGCAGAGCGAGCGCGGCGACATCTACAAGCAGTACGCCCAGCAACTGGTTGAC ATGGGCCACGCCTTCCCGTGCTTCTGCACCGCCGAAGAGCTGGACCAGATGCGCGCCGAGCAGATGGCCCGTGGCGAGACCCCGCGCTACGACGGTCGAG CCTTGCTGCTGTCGGCCGAAGAAGTGCAGCGCCGCCTGGCCGCTGGCGAGCCGCATGTGATCCGCATGAAGGTGCCGAGTGAAGGCGTCTGCGTGGTACC GGACATGCTCCGTGGCGATGTCGAGATCCCGTGGGACCGCATGGACATGCAGGTACTGATGAAGACCGACGGTCTGCCGACCTACTTCCTGGCCAACGTC GTCGACGACCACCTGATGGGCATCACCCACGTGCTGCGCGGTGAAGAATGGCTGCCGTCGGCGCCCAAGCTGATCAAACTGTACGAGTACTTCGGTTGGG AACAGCCAACCCTGTGCTACATGCCGCTGCTGCGTAACCCGGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCGACCTCGGTGACCTTCTACGAGCGCAT GGGCTTCATGCCGGAAGCGATGCTCAACTACCTGGGGCGCATGGGCTGGTCGATGCCGGACGAGCGTGAAAAATTCTCCCTGGCCGAGATGGTCGAGCAC TTCGATCTGTCGCGGGTTTCCCTGGGCGGGCCGATTTTTGACATCGAGAAGCTGTCCTGGCTCAACGGCCAGTGGCTGCGCGACCTGCCGGTGGAAGAGT TCGCCGCACGGGTGCAGAAGTGGGCGTTCAACAGCGACTACATGATGAAGATCGCGCCGCATGTGCAGGGCAGGGTAGAAACCTTCAGCCAGATCGCCCC GCTGGGTGGCTTCTTCTTTGAAGGCGCGCTCAAGCTCGATGCCAAGCTGTTCGAGCACAAAAAATTGTCGGCCGACCAGGTGCGTCAGGTGATCCAGTTG ATCCTGTGGAAGCTGGAAAGCCTGCGTCAGTGGGAAAAAGACCGCATTACCGGTTGCATCCAGGCCGTGGTCGAGGCCCTGGAGCTGAAGCTGCGTGATG CCATGCCGCTGATGTTCGCCGCGATCAGCGGTCAGGCCAGTTCGGTATCGGTACTCGACGCCATGGAAATCCTCGGCCCGGACCTGACCCGCTATCGCCT GCGTCAGGCTCTGGACCTGCTCGGTGGTGTGTCGAAGAAAGAAAACAAAGAGTGGGAGAAGCTGTTGGGCACCATCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TACCTATCGCGGGGCAAGCCCGCTCCCACCGGTGGGAGCGGGCTTGCCCCGCGAAGAGGCTCCAAACCCCAGCAAAACCGGGGTGAATCACCAAGCTGGC CGGTAAGTGTTTGTTATCTCGGAAAAAATTTTCAGAATTTGTTGAAAATTTATTTGACAGGTCTGCAATCCGATCTTAATATGCGCCCCGTCCACAGCGA TGAACGAAACGAAGCGCGAAGCACCCAGCCAAGCGATTCAGTTCAAAGCGACATTGTGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGG AGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAAATTCCGATTCGTAGTCATCTACACTGACTGCGGAGTCAACCGGGTTCCAGCGACCGGGTTGTTAAG GTAAGAAGGTTCGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAG
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Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGIEWSEGPDVGGPHGPYRQSERGDIYKQYAQQLVD MGHAFPCFCTAEELDQMRAEQMARGETPRYDGRALLLSAEEVQRRLAAGEPHVIRMKVPSEGVCVVPDMLRGDVEIPWDRMDMQVLMKTDGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLIKLYEYFGWEQPTLCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLAEMVEH FDLSRVSLGGPIFDIEKLSWLNGQWLRDLPVEEFAARVQKWAFNSDYMMKIAPHVQGRVETFSQIAPLGGFFFEGALKLDAKLFEHKKLSADQVRQVIQL ILWKLESLRQWEKDRITGCIQAVVEALELKLRDAMPLMFAAISGQASSVSVLDAMEILGPDLTRYRLRQALDLLGGVSKKENKEWEKLLGTIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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