Pseudomonas alkylphenolia KL28, PSAKL28_RS05195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas alkylphenolia strain KL28, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGTCTGGCGGCCCTGTATGAAAGCTGGTCGATCCCGATCGCGGTCATGCTCGTGGTGCCGTTGGGGATTATCGGCGCACTGCTGGCCACCAGCCTGCGCG GCCTGTCCAACGACGTGTACTTCCAGGTGGGTCTGTTGACCACCATTGGCCTGGCGGCGAAGAACGCGATCCTGATCGTCGAATTCGCCAAGGAACTGCA CGAGCAGGGCCGCAGCCTGGTCGATGCCTCCATCGAGGCTTGCCGCATGCGTCTACGGCCAATCATCATGACCTCGCTGGCGTTCATTCTCGGCGTGGTA CCGTTGGCTACTTCCACCGGGGCGGGCTCGGGCAGCCAGCATGCCATCGGTACCGGGGTAATCGGCGGGATGTTGACGGCCACCGTGCTGGCGATCTTCT GGGTACCGCTGTTCTTCGTTAGCGTGTCGTCGCTGTTCAGTAGCAAGAAAACTGAAGAAGAAGACGCCACTCCTGAAACTCCACGCTATGAGGGCGGGCA
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| DNA Sequence for Gene |
>PSAKL28_RS05195
ATGAGTAAGTCCCTGTTGTCCCTGGCGGTCACCGCTTTCATTCTTGGCGGCTGCTCGCTGATCCCTGACTACCAGACCCCGGACGCACCGGTGGCCGCGC AGTGGCCGCAAGGCCCTGCCTATTCGCCGACCGAGTCGGCGAATGTGGCCGCCGCCGAGCAAGGCTGGCGTCAGTTTTTCCAGGACCCGGCGCTGCAACA ACTGATCCAGACTGCGCTGGTCAACAACCGCGACCTCAAGGTCGCGGCCTTGAACATCGATGCCTACCGGGCGCAGTACCGCATCCAGCGGGCCGATCTG TTCCCGGCGGTCAGCGCCAATGGCAATGGCAGCCGCCAACGGCTGCCAGGTAACCTGTCGCAGACCGGCGATTCCGAGATCACCAGCCAGTACTCGGCAA CCCTCGGGGTGAGCGCCTATGAACTCGACCTGTTCGGTCGCGTGCGCAGCCTCACCGAGCAGCAACTGGAAATCTACCTGTCCAGCGAAGAAGCCCGGCG CTCGACCCAGATCGCCCTGGTGGCGAGTGTGGCCAACGCCTACTTCACCTGGCAGGCCGACCAGGACCTGCTCAAGCTGACCGAAGACACCCTCAAGACC TACGAGCAAAGCTACGCATTGACCTTGCGCAGCAACGAAGTGGGTGTGGCGTCGGCCTTGGACCTGAGCCAGGCACGGACGTCGGTAGAAGGCGCCCGGG TCAAGCTGGCCCAGTACCAGCGCCTGGTTGCCCAGGACCAGAACAGCCTGGCGGTACTGCTCGGCACCGGTGTGCCGGACAACCTGCCAGCAGCCAAGGA CCTCAACAGCGACTTGCTGGCCGAAGTACCTGCAGGCCTGCCGTCCGACGTACTGCACCGGCGTCCGGACATCCAGGAAGCCGAACACCTGCTCAAGGCC GCCAATGCCAACATCGGCGCCGCCCGGGCAGCGTTCTTCCCGAGCATCAGCCTGACCGCCAACGCCGGTACCATCAGCCCGGACATGGGTGGACTGTTCA AGGGCGGCTCTGGCACCTGGCTGTTCCAGCCACAGATCAGCCTGCCGATCTTCAACGCCGGCGCCCTGCGTGCCAGCCTCGACTACTCGAAGATCCAGAA GGACATCAACGTCGCCAAGTACGAGAAAACCATCCAGACCGCCTTCCAGGAAGTCTCCGATGGCCTCGCCGCGCGCAAGACCTTCAACGAGCAGTTGCAA GCCCAGCGTGATCTGGTGTCTGCCAACCAGGACTACTACCGTCTGGCCGAGCGTCGCTACCGTATCGGTGTCGACAGCAACCTGACCTTCCTCGACGCCC AGCGTCAGTTGTTCAACAGCCAGCAGTCGTTGATCACTGACCGCCTGTCGCAGCTGGTCAGCGAGGTCAACCTGTACAAGGCCCTCGGTGGCGGCTGGTA CGAGCAGACCGGTCAGGCGCAGCAGCAGGCGGCGGCCGAGTCGTCGAAAGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCAGGTTTGTGCTTCAGAAGCCCACCCTTGCGGTGGGCTTTTTTGTGTCGGTCCTTATCGCGGGGCAAGCCCGCTCCCACCGAAAATCACCTCTCACTG TGGGAGCGGGCTTGCCCCGCGATAATTATTTAACCAATCAGTTAACGTTCGATTACCGCCCAATACCGCCTGTAACGAATTGATTCACCCCCTCCCGTCG CCGCACCATCCCTTCGCAGCTTTTCCAAAGCACACCCCAAAGACTGTTGCCCGGCCTGCGACTCAAAAACCTCGCAGCGGATGGCTTCGGCTTGAATAAA AACAAGAGACACATCACATGAGCACACCCGCACCCGCACGACACCTGCTTCCCGGCCTGCTGGCCATGACTTGCGCACTCCCGGCCCTCGCGGCCGAAAG CGGCTTTGCCGAAGATGCCAAGGTCAACCTCAACCTGCGCAACTTCTACATCAACCGCAACTTCGTCGACCCGGCCAACCCGCAAGGCAAGGCCGAGGAA
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| Amino Acid Sequence |
>adeC/adeK/oprM family multidrug efflux complex outer membrane factor
MSKSLLSLAVTAFILGGCSLIPDYQTPDAPVAAQWPQGPAYSPTESANVAAAEQGWRQFFQDPALQQLIQTALVNNRDLKVAALNIDAYRAQYRIQRADL FPAVSANGNGSRQRLPGNLSQTGDSEITSQYSATLGVSAYELDLFGRVRSLTEQQLEIYLSSEEARRSTQIALVASVANAYFTWQADQDLLKLTEDTLKT YEQSYALTLRSNEVGVASALDLSQARTSVEGARVKLAQYQRLVAQDQNSLAVLLGTGVPDNLPAAKDLNSDLLAEVPAGLPSDVLHRRPDIQEAEHLLKA ANANIGAARAAFFPSISLTANAGTISPDMGGLFKGGSGTWLFQPQISLPIFNAGALRASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFNEQLQ AQRDLVSANQDYYRLAERRYRIGVDSNLTFLDAQRQLFNSQQSLITDRLSQLVSEVNLYKALGGGWYEQTGQAQQQAAAESSKG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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