Strain | Pseudomonas alkylphenolia strain KL28, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ACCGGTGTTTCGCCGCGGGGCGTGACCTGGACCCTGCTGTTGATCGGCGTCGGCCTGACCCTGGGCAACATCGTTGGCGGCAAGCTGGCCGACAAGCGCC TGGGCGCCACCCTGGTGGGTGTGTTCGCCAGCATGGCGGTGGTCTCCACCGTACTGAGCTGGACCAGCGTTGCCCTGATCCCCGCCGAGATCACCCTGTT CCTCTGGGCCACGGCCGCCTTTGCCGCGGTACCGGCCCTGCAAGTCAACGTGGTGACCTTCGGCAAGGCTGCTCCGAACCTGGTGTCGACCCTGAACATC GGTGCTTTCAACCTGGGTAACGCCCTCGGCGCCTGGGTCGGCGGCACGGTCATCGCGCAAGGACTGGGCCTGACCCGCGTTCCACTGGCCGCCGCTGCAC TGGCCGTGCTGGCCCTGATCGTCACCCTGATTACCTTCAGCCAGCGCGGCAACAACGCCGAACTGGCACCTGCCACTCACTGATCAGCCTTGAGGTTTAT
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DNA Sequence for Gene |
>PSAKL28_RS04975
ATGACGACTATTTTCGATCCGATCACCCTCGGCGACCTCGAATTGCCGAACCGCATCATCATGGCTCCGCTGACCCGCTGCCGTGCCGATGAAGGCCGGG TACCCAACGCGTTGATGGCCGAGTACTACGTGCAACGTGCCAGCGCCGGCCTGATCCTCAGCGAGGCCACTTCGGTGACGCCAATGGGCGTCGGTTATCC GGACACCCCGGGTATCTGGTCCGATGACCAGGTGCGTGGCTGGACCAACGTCACCAAGGCCATCCATGGCGCCGGCGGGCGGATCTTCCTGCAGCTGTGG CATGTCGGGCGCATCTCGCATCCGCTCTACCTCAACGGAGAAACCCCGGTGGCACCGAGCGCGATCCAGCCTAAAGGCCACGTCAGCCTGGTCCGCCCAC TGGCTGACTACCCGACGCCACGGGCCCTGGAAACGGAAGAAATCGCCGATATCGTCGAGGCCTACCGCACCGGTGCCGAGAACGCCAAGGCCGCAGGTTT TGATGGTGTCGAAGTGCATGCCGCGAACGGCTACCTGCTCGATCAGTTCCTGCAGAGCAGCACCAACCAGCGCAGCGACCAGTACGGTGGTTCGCTGGAA AACCGTGCCCGGCTGCTGCTGGAAGTGACCGATGCGGTGATCGACGTGTGGGGCGCGCAACGCGTGGGCGTACACCTGGCGCCACGTGCCGACTCCCATG ACATGGGAGACGCCAATCGCGCCGAAACCTTTACTTATGTGGCCCGTGAACTGGGCAAGCGCGGGATTGCCTTTATCTGCTCGCGGGAGAAGGAAGCTGA CGACAGCATCGGGCCGTTGATCAAGGAAGCCTTCGCTGGCCCTTACATCGTCAACGAGCGCTTCACCAAGGCCAGTGCCAACGCTTCGCTGGCCAACGGC CGGGCGGATGCGGTGGCCTTCGGTGTGCCGTTCATCGCCAACCCGGACCTGCCGGCCCGCCTGGCAGCGGATGCGCCGTTGAACGACGCGCGTCCTGAGA CCTTCTATAGCAAAGGGCCGGTCGGTTATATCGACTATCCGCGGATGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAAGCATCGCGGGGCAAGCCCGCTCCCACAGGAGATTTAATTAACCTGTGGGAGCGGGCTTGCCCCGCGATGATCAAGGCCGCGCATTGATCTGCTGTTG CAGGTTCTGCACTTGGCTTTGCAAGGTATTGAGACTACGCGTCATCTGCCGGCGAAACGCATCGAACTCGGCAACCGAAGCACCACTGGCCGCAGGTGCC GCCGGACGATTCTCCTGCTCGCTCTTGAGCACCAGCAGATCCTGCTCCAGGCGCTCGATGGCCGCACTCGGATTGCCCTGTTTCTTCAACGCGGCAACCT CGCCAGTTAGGCTGTTGATCTGGGTGTCGAGCTTGCCGCCGTCCACCTGAGCCGCCTTCAAGGCCGCCAGTTCGCTGTTCACCGCTTTCAGTTGGGTCTG CAATTCAGCTTGCAGCTTGGCAGTCGCCGCCTGCTCTTCAGTGGCCTGCGCCAATACTTGCTCCAAACGCTTGCCCAGATCCCCCGCCTGCCCGGCAACA
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Amino Acid Sequence |
>NADH:flavin oxidoreductase
MTTIFDPITLGDLELPNRIIMAPLTRCRADEGRVPNALMAEYYVQRASAGLILSEATSVTPMGVGYPDTPGIWSDDQVRGWTNVTKAIHGAGGRIFLQLW HVGRISHPLYLNGETPVAPSAIQPKGHVSLVRPLADYPTPRALETEEIADIVEAYRTGAENAKAAGFDGVEVHAANGYLLDQFLQSSTNQRSDQYGGSLE NRARLLLEVTDAVIDVWGAQRVGVHLAPRADSHDMGDANRAETFTYVARELGKRGIAFICSREKEADDSIGPLIKEAFAGPYIVNERFTKASANASLANG RADAVAFGVPFIANPDLPARLAADAPLNDARPETFYSKGPVGYIDYPRM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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