Strain | Pseudomonas alkylphenolia strain KL28, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TATGCGTTACTACAACGTGATCTACGACATCATTGAAGACGTCAAGAAAGCCCTGACCGGTATGCTCGGCAGCGATGTTCGCGAGAACATCCTGGGTATC GCCGAAGTGCGTGATGTGTTCCGTTCGCCGAAATTCGGCGCCATCGCTGGCTGTATGGTCACCGAGGGTGTGGTCTACCGCAACCGTCCGATCCGCGTAC TGCGCGAAGACGTGGTGATCTTCGAAGGCGAGCTGGAATCGCTGCGTCGCTTCAAGGACGATGCGTCCGAAGTGCGTGCCGGCATGGAATGCGGTATCGG CGTGAAGAGCTACAACGACGTCAAAGTCGGCGACAAGATCGAAGTCTTCGAGAAAGTCCAAGTGGCTCGTACGCTCTAAGCATCGAGCATGGGAAGCGCG AAATGCCCGTCGCAAGGCGGTCGCCAGCGCCTCTGAACGCAACGCCCGGTCAGGCTCAAGCCTGGTCGGGCGTTTGCCGCTTTAGTTACAGGTAGCAAAA
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DNA Sequence for Gene |
>PSAKL28_RS03765
ATGGCCAAAGAATATAGCCGTACCCAACGCATTGGCGATCAGATGCAGCGTGAACTCGCGCAACTGATTCGTCGCGAAGTCAAAGATCCACGCGTGGGTC TTGTGACCATCACTGCCGTCGACGTCAGTCGCGATGTCGGCCACGCCAAGGTGTATATCACCGTGATGGGCCAGGACAGCGCTGAAGACATCAAGCAAAG CCTTAAAGTGCTCAATTCCGCCGCAGGCTTTCTGCGCATGCAATTGGGCAAGGAAATGAAGCTGCGCAGTGTGCCGCAGCTGCATTTCCACTACGACGAG AGCGTGACGCGTGGCGCCCACCTGTCGGCGCTGATCGAGCGTGCTGTTGCCGAAGACAGTCAGCACCAGGCCGCCGATACCCCGGACACCAAGGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGTGGCCCAGGTCAAACGTATTCGTCGTAACGTCAGTGGCATCATCCTGCTCGACAAGCCGTTGGGGTTTACCTCCAACGCTGCGCTGCAGAAGGTCC GCTGGCTGCTCAATGCCGAGAAGGCCGGTCACACCGGCAGTCTCGACCCGCTGGCCAGTGGCGTGCTGCCGCTGTGCTTCGGTGAGGCCACCAAGTTTTC CCAGTACCTGCTCGATTCCGACAAAGGTTACGAGACGGTCATGCAACTGGGGCAGACCACCACCACCGGCGATGCCGAGGGTGAAGTGCTGAAAACCCGC GAAGTGACCGTTGGTCGCGCCGATGTTGAAGCCGTTCTGCCACAATTTCGTGGTGAAATCAGTCAGATACCACCGATGTACTCGGCCCTCAAGCGCGACG GACAGCCGCTGTACAAGCTCGCCCGTGCAGGTGAAGTAGTGGAGCGCGAGGCGCGTTCTGTTACTATTAACCGCTTGGAGTTGCTCGAGTGCGAAGGCAC
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Amino Acid Sequence |
>ribosome-binding factor A
MAKEYSRTQRIGDQMQRELAQLIRREVKDPRVGLVTITAVDVSRDVGHAKVYITVMGQDSAEDIKQSLKVLNSAAGFLRMQLGKEMKLRSVPQLHFHYDE SVTRGAHLSALIERAVAEDSQHQAADTPDTKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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