Pseudomonas alkylphenolia KL28, PSAKL28_RS00055 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas alkylphenolia strain KL28, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGTCTTTGAGCAAACCCTGAGCGATTTGGTCGAGCTCGAAGGGCTGACCCTGAGTTATTACCGTGGCTGGGACAAGGATCGAGAACTCAGTGAAGTGCTC GCCTCTTCCTTGCAACGAGATCAGCACATGGGCCACACCCAGGCCGGACCACAACGCGCTGATTTGCGCCTGAGACTCGGCGTTCATAACGCCGCCGACA TTTTGTCTCGGGGCCAGCAGAAACTTGTGGTCTGTGCGTTGCGTATCGCCCAGGGACATTTGGTCAGCCAGGCTCGGCGTGGCCAATGTATTTATCTAGT GGATGACTTGCCATCCGAGTTGGATGAGCAGCACCGTCGCGCACTTTGCCGCTTGTTGGAAGACTTACGCTGCCAGGTATTTATCACCTGTGTAGATCAC GAATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTTGCTTTGTTCCACGTGGAACAGGGCCGTATCACCCAGACCCACGACCATCGGGAGTGAAGGC
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| DNA Sequence for Gene |
>PSAKL28_RS00055
|gyrB
ATGAGCGAAAATCAAACGTACGACTCCTCCAGCATTAAAGTGCTGAAAGGGCTAGATGCCGTGCGCAAGCGTCCCGGTATGTACATTGGCGACACCGATG ATGGTAGCGGCCTGCACCACATGGTGTTCGAGGTGCTCGATAACTCGATCGACGAAGCACTCGCCGGCCACTGTGATGACATTACCGTAACTATCCACCC GGACGAATCCATCAGTGTTCGCGACAACGGTCGCGGTATCCCAGTCGACGTGCATAAAGAGGAAGGCGTATCCGCCGCCGAGGTCATCATGACCGTCCTG CACGCTGGCGGTAAGTTCGACGACAACTCCTACAAAGTATCCGGCGGTCTGCACGGTGTAGGCGTGTCTGTGGTTAACGCCCTCTCCGAAGAGCTGATCC TGACTGTTCGCCGTAGCGGCAAGATCTGGGAACAGACCTATGTTCACGGTGTTCCGCAAGCTCCGATGGCCATCGTCGGTGACAGTGAAACCACCGGTAC CCATATTCACTTCAAGCCGTCGTCCGAAACCTTCAAGAACATCCACTTCAGCTGGGACATCCTGGCCAAGCGGATTCGTGAACTGTCGTTCCTCAACTCT GGCGTCGGCATCCTCTTGAAGGACGAGCGTTCGGGCAAGGAAGAGTACTTCAAGTACGAAGGCGGTCTGCGTGCCTTCGTTGAGTACCTGAACACCAACA AGACCCCGGTCAACCAGGTGTTCCACTTCACCGTTCAGCGTGAAGACGGTGTGGGCGTGGAAATCGCTCTGCAATGGAACGACAGCTTCAATGAGAACCT GTTGTGCTTCACCAACAACATTCCGCAGCGCGACGGTGGTACCCACCTGGTCGGCTTCCGCTCGGCGTTGACCCGTAACCTGAACAACTACATTGAGCAG GAAGGTCTGGCCAAGAAGAACAAGGTTTCGACCACCGGCGACGACGCCCGCGAAGGTTTGACCGCGATCATTTCGGTGAAGGTGCCAGATCCTAAGTTCA GCTCGCAGACCAAGGACAAGCTGGTTTCTTCGGAAGTGAAAACTGCCGTGGAACAGGAAATGGGCAAGTACTTCTCCGACTTCCTGCTGGAGAACCCGAA CGAAGCCAAGGCGGTTGTCGGCAAGATGATCGACGCCGCGCGTGCTCGTGAAGCAGCGCGCAAGGCGCGGGAAATGACTCGCCGTAAAGGCGCGCTGGAT ATTGCTGGTTTGCCAGGCAAACTGGCGGACTGCCAGGAGAAGGACCCTGCCCTTTCCGAACTGTACCTGGTGGAGGGTGACTCCGCAGGTGGTTCGGCCA AGCAAGGTCGTAACCGTAAGACCCAGGCCATCCTGCCGCTCAAGGGTAAGATCCTCAACGTCGAGAAAGCACGTTTCGACAAGATGATCTCGTCCCAGGA AGTTGGCACCCTGATTACCGCACTGGGCTGTGGTATCGGTCGCGAAGAGTACAACATCGACAAGTTGCGTTATCACAACATCATCATCATGACCGATGCT GACGTTGACGGTTCGCACATCCGTACCCTGCTGCTGACGTTCTTCTTCCGTCAGTTGCCGGAGCTGGTCGAGCGTGGCTACATCTATATCGCTCAGCCAC CGCTGTACAAGGTCAAGAAAGGCAAGCAGGAGCAGTACATCAAAGACGACGAGGCCATGGAAGAGTACATGACCCAGTCGGCTCTGGAAGACGCCAGCCT GCACCTGGACGAATCGGCACCACCGGTTTCCGGTGTCGAGCTGGAGCGCCTAGTCAACGAATTCCGTACCGTGATGAAGACCCTCAAGCGTCTGTCGCGC CTGTACCCACAGGAACTGACCGAGCACTTCGTCTACCTGCCAGCCGTGTCCCTGGATCAGCTGGGCGACCACGCTGCCATGCAGGAATGGCTGGGCAAAT TCGAGGAGCGCCTGCGCACCAGCGAGAAGTCGGGTCTGCTGTACAAGGCCAGCCTGCGTGAAGATAAAGAGCGTAATGTCTGGCTGCCGGAAGTGGAAAT CACCTCCCATGGCCTGGCCAGCTATGTCACCTTCAACCGTGACTTCTTCGGCAGTAACGACTACCGCACCGTCACAGCCCTGGGCGCACAGCTGAGCACC CTGCTCGGCGAAGGCGCCTATGTGCAACGTGGCGAGCGCAAGAAGGCGATCACCGAGTTCAAGGAAGCGCTCGACTGGCTGATGACCGAAAGCACCAAAC GTCACACCATCCAGCGCTATAAAGGTCTGGGTGAGATGAACCCTGACCAGCTGTGGGAAACCACCATGGACCCAACTGTGCGCCGCATGCTCAAGGTGAC CATCGAGGACGCGATCGCTGCCGATCAGATCTTCAACACCCTGATGGGCGACGCAGTTGAGCCACGTCGTGAGTTCATCGAAAGCAACGCCCTGGCGGTG TCTAACCTGGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAGGTGTCGATGGGCACATTAAGTGTCGCAAGTGGGCGAGTTACTGTCGCTTTCTAGGGAAAACCCCGGCCTTGGTGTCGGGGTTTTTCTTTGTGGCGT AGCCTAGTCAAAGCGATACACACCAGGCTCCAAGCCCTAGTTTGGGTTTTATGGGCGATGTGATGGAGCATGGTTGCGGCTTCATCGAAACAAACTGCAT CCTTGCTTGGCTGCTTGGCTGCTTGGCTGCTTGGCTGCTTGGCTGCTTGGCTGCTTGGCTGCTTGTGTAGGTGGACAAAGTTAAAAGTCAGGGACAAAGT TAACTGAAACGAAAAGCCCCCGGTGGATTGATCCACTGGGGGCTTTCCGTTTCAAGGGTGTAGGAGTTACCAACGTTCGTCAGCAAGGTGAGAGCTGTTG AGCTGCTCTTTCAACAGGTGCCATTGAGGGAGATGCTGATCTAGCAGGCTGATGAATCGGTCGTTGTGGTGGCGTTCATGCAGGTGAGCCAGTTCGTGCA
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVLDNSIDEALAGHCDDITVTIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSEELILTVRRSGKIWEQTYVHGVPQAPMAIVGDSETTGTHIHFKPSSETFKNIHFSWDILAKRIRELSFLNS GVGILLKDERSGKEEYFKYEGGLRAFVEYLNTNKTPVNQVFHFTVQREDGVGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ EGLAKKNKVSTTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVKKGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPPVSGVELERLVNEFRTVMKTLKRLSR LYPQELTEHFVYLPAVSLDQLGDHAAMQEWLGKFEERLRTSEKSGLLYKASLREDKERNVWLPEVEITSHGLASYVTFNRDFFGSNDYRTVTALGAQLST LLGEGAYVQRGERKKAITEFKEALDWLMTESTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIFNTLMGDAVEPRREFIESNALAV SNLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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