Pseudomonas aeruginosa MH19, PAMH19_RS23135

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa genome assembly PAMH19, contig MH19_contig13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATGTCGGGGGTTCGCTGGGGATGGAAAGGGCATCATGGCTGAGGTGGCTTTATTCGTCGAACGATGGCTGGCCCTGCCGGTATATCGGCCAGGACTTCA TGCGCTGCGGAAATGGCCTAACCAGGTGCAGCGGCTTGCAATCAAAAACGCTGGGCTCGCAATCAGCGTGGCTTTGTCCGGAAGCTCGCGAAGGGGCGGC ATGGATGAATTTTGAAAGTGGGAGTTCGTTAATGAACCGAAGGTATGCGGCTTCCGTGACTGGCAGGGATAGATGAGGTTTGCGTGCAGAAAATGACCGC TGGATGGGCGCATGCGCAAACGAGGTCGTTTCGTAGAAGGGAATGGCCAAGGATGGGCCTTCTGGGTCATTGGATACGGGATATTGCAGTTTGATTGAAG TGTATTTCCAGTGTATTGGCGCTCATCTGGCAAGGGGTGTTTAAAAAGGCTAATTCGACGTAAATAATCAGCCATGCACTCATGGAAGTAGGAGATACAT
DNA Sequence for Gene
>PAMH19_RS23135
ATGGCACGACCCATTGCTGACCTTATCCACTTCAACTCTACAACTGTTACGGCAAGCGGAGACGTTTATTACGGCCCTGGGGGAGGTACCGGCATTGGCC CCATTGCCAGACCTATAGAGCACGGCTTGGATTCGTCCACTGAAAATGGCTGGCAAGAGTTTGAAAGTTATGCTGATCTGGGCGTTGACCCCAGACGCTA TGTTCCTCTTCAGGTTAAAGAAAAACGCAGGGAGATCGAGCTTCAGTTCCGAGATGCCGAGAAAAAACTTGAGGCGTCGGTACAAGCCGAGCTGGATAAG GCTGATGCCGCTCTTGGTCCGGCAAAGAATCTTGCACCATTGGACGTCATCAACCGCAGTCTGACCATCGTTGGAAACGCCCTCCAGCAAAAGAATCAAA AACTACTGCTGAATCAGAAGAAGATTACCAGCCTGGGTGCAAAGAATTTCCTTACCCGTACGGCGGAAGAGATCGGTGAACAAGCGGTGCGAGAAGGCAA TATTAACGGGCCTGAAGCCTATATGCGCTTCCTCGACAGGGAAATGGAAGGTCTCACGGCAGCTTATAACGTAAAACTCTTCACCGAAGCGATCAGTAGT CTCCAGATCCGCATGAATACGTTGACCGCCGCCAAAGCAAGTATTGAGGCGGCCGCAGCAAACAAGGCGCGTGAACAAGCAGCGGCTGAGGCCAAACGCA AAGCCGAAGAGCAGGCCCGCCAGCAAGCGGCGATAAGAGCTGCCAATACCTATGCCATGCCGGCCAATGGCAGCGTTGTCGCCACCGCCGCAGGCCGGGG TCTGATCCAGGTCGCACAAGGCGCCGCATCCCTTGCTCAAGCGATCTCCGATGCGATTGCCGTCCTCGGCCGGGTCCTGGCTTCAGCACCCTCGGTGATG GCCGTGGGCTTTGCCAGTCTGACCTACTCCTCCCGGACTGCCGAGCAATGGCAGGACCAAACGCCCGATAGCGTTCGTTACGCCCTGGGCATGGATGCCG CTAAATTGGGGCTTCCCCCAAGCGTAAACCTGAACGCGGTTGCAAAAGCCAGCGGTACCGTCGATCTGCCGATGCGCCTGACCAACGAGGCACGAGGCAA CACGACGACCCTTTCGGTGGTCAGCACCGATGGTGTGAGCGTTCCGAAAGCCGTTCCGGTCCGGATGGCGGCCTACAATGCCACGACAGGCCTGTACGAG GTTACGGTTCCCTTTACGACCGCAGAAGCGCCGCCACTGATCCTGACCTGGACGCCGGCGAGTCCTCCAGGAAACCAGAACCCTTCGAGTACCACTCCGG TCGTACCGAAGCCGGTGCCGGTATATGAGGGAGCGACCCTTACACCGGTGAAGGCTACCCCGGAAACCTATCCTGGGGTGATTACACTACCGGAAGACCT GATCATCGGCTTCCCGGCCGACTCGGGGATCAAGCCGATCTATGTGATGTTCAGGGATCCGCGGGATGTACCTGGTGCTGCGACTGGCAAGGGACAGCCC GTCAGCGGTAATTGGCTCGGCGCCGCCTCTCAAGGTGAGGGGGCTCCAATTCCAAGCCAGATTGCGGATAAACTACGTGGTAAGACATTCAAAAACTGGC GGGACTTTCGGGAACAATTCTGGATAGCTGTGGCTAATGATCCTGAGTTAAGTAAACAGTTTAATCCTGGTAGTTTAGCTGTAATGAGAGATGGAGGTGC TCCTTATGTCAGAGAGTCAGAACAGGCTGGCGGGAGAATAAAGATCGAAATCCACCACAAGGTTCGAGTAGCAGATGGAGGCGGCGTTTACAATATGGGG AACCTTGTTGCAGTAACGCCAAAACGTCATATAGAAATCCACACGGGAGGGAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TATGAAGTCCAAGATTTCCGAATATACGGAAAAAGAGTTTCTTGAGTTTGTTGAAGACATATACACAAACAATAAGAAAAAGTTCCCTACCGAGGAGTCT CATATTCAAGCCGTGCTTGAATTTAAAAAACTAACGGAACACCCAAGCGGCTCAGACCTTCTTTACTACCCCAACGAAAATAGAGAAGATAGCCCAGCTG GAGTTGTAAAGGAAGTTAAAGAATGGCGTGCTTCCAAGGGGCTTCCTGGCTTTAAGGCCGGTTAGTTGGCCATCAACAAGCCCCGTTTCGACGGGGCTTG TTCCATGTTGACGCTGCTCTATCTTGACAGTCTGTCCTGAATATTCTTGAAGACAATCACATTATGAGCCGCAACCACCGCAAAACACCCATCGTCGGGC GCACGAGCTGCCGTAGCGAGCTCTCCACGTTGGCCAGCAGCCCACCTCTCCCTACTGGAAAGTCAGGTCAATAACACTGGTGCCACGTAAGGATGGGCGT
Amino Acid Sequence
>pyocin-S1
MARPIADLIHFNSTTVTASGDVYYGPGGGTGIGPIARPIEHGLDSSTENGWQEFESYADLGVDPRRYVPLQVKEKRREIELQFRDAEKKLEASVQAELDK ADAALGPAKNLAPLDVINRSLTIVGNALQQKNQKLLLNQKKITSLGAKNFLTRTAEEIGEQAVREGNINGPEAYMRFLDREMEGLTAAYNVKLFTEAISS LQIRMNTLTAAKASIEAAAANKAREQAAAEAKRKAEEQARQQAAIRAANTYAMPANGSVVATAAGRGLIQVAQGAASLAQAISDAIAVLGRVLASAPSVM AVGFASLTYSSRTAEQWQDQTPDSVRYALGMDAAKLGLPPSVNLNAVAKASGTVDLPMRLTNEARGNTTTLSVVSTDGVSVPKAVPVRMAAYNATTGLYE VTVPFTTAEAPPLILTWTPASPPGNQNPSSTTPVVPKPVPVYEGATLTPVKATPETYPGVITLPEDLIIGFPADSGIKPIYVMFRDPRDVPGAATGKGQP VSGNWLGAASQGEGAPIPSQIADKLRGKTFKNWRDFREQFWIAVANDPELSKQFNPGSLAVMRDGGAPYVRESEQAGGRIKIEIHHKVRVADGGGVYNMG NLVAVTPKRHIEIHTGGK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site