Strain | Pseudomonas aeruginosa genome assembly PAMH19, contig MH19_contig9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGACGGGTCTTGGTGTCGGCGAGCTTGATGTCGCGGGCCAGTTCGGGGGTCAGCTTGCCCTGTTCCTCGATGCTGGCGAGGATCGCGCCGCGGCGTTCT TCCAGTTCGCGCAGGTAGCGCAGGCGCTCTTCCAGCATGCGCAACTGGGTATCGTCGAGGCTGCCGGTGACCTCTTTGCGGTAACGGGCGATGAAGGGAA CGGTGGAGCCTTCGTCGAGCAGGGCGACGGCAGCGGCGACTTGCTGCGGTTGAACGCGGCCGGAGGGCAGTGCGGAGAGCTCTTCGGCGATACGGGTGTT GATGCTGTCCATTGATCCACCTGGTAAAACGAACGAAAACGGGCCGTGTAGACAACGCCCCGCCGCAAAAGCGCCGCATTATACCTGCCAAGTTTCGCGT TGGAGGGCGGCTGGTCGGGGAAAAATCTGCTAACAATGGACAGTCCGGCCCAGCCGCTACCTGGGCGATAATGCCCGCCTGACTCATTCTGGGAGTTTCT
|
|
DNA Sequence for Gene |
>PAMH19_RS15245
ATGTCGAACCCTGCCGCCCTGGCCGAAGGTGAAAAGATCCTCGTCGTCGACGACGACGCCCGCCTGCGCCGCCTGCTCGAACGTTTCCTCGACGAGCAGG GCTACCGCGTCCGCGCGGTGGAGAACACCGAGCAGATGGATCGCCTTCTATCCCGCGAACTGTTCCAGTTGGTTGTGCTCGACCTGATGCTTCCCGGCGA GGACGGCCTCACTGCCTGCCGCCGCCTGCGCGAACAGAACAATCAGGTGCCGATCATCATGCTCACCGCCAAGGGCGACGAGGGCAGCCGCATCCAGGGC CTGGAACTGGGCGCCGACGACTACCTGGCCAAGCCGTTCAACCCGCGCGAACTGCTGGCGCGGATCAAGGCCGTGCTGCGCCGCCAGGCGCCGCTGGTGC CCGGCGCGCCTGCCGGTGCCGACGAGGTGGTGACCTTCGGCGACTACCAGCTGTTCCTCGCCACCCGCGAACTGAAGAAGGGCGACGAGGTACACATGCT GACCACCGGCGAGTTCGCCGTGCTCAAGGCCCTGGTGCAGCACGCCCGCGAACCGCTGACCCGGGACAAGCTGATGAACCTCGCCCGTGGCCGCGAGTGG GATGCCCTGGAGCGTTCCATCGACGTGCAGATCTCGCGCCTGCGCCGGCTGATCGAGCCGGATCCGTCCAAGCCGCGCTATATCCAGACGGTCTGGGGCG TCGGCTACGTGTTCGTGCCGGACGGCAACGCGCGCAAGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GTCTCCGCGCGGCCGGTGCAGCGATGCACCGGCCGCGTCGTCTTACCCGCAACAGGCGTCGGCCCCGTCCGCCGGCGCGCAACCGGTCCGATCGATGAAA ACGCCGCTCTGGTTCCCGCAAAGCTTCTTCGCCCGCACCCTCTGGCTGGTGCTGATCGTCGTGCTGTTCTCCAAGGCGCTGACCCTGGTCTACCTGCTGA TGAACGAGGACGTGATCGTCGACCGCCAGTACAGCCACGGCGCGGCGCTGACCATCCGCGCGTTCTGGGCTGCCGACGAGGAGTCGCGCGCGGCCATCGC CAAGGCTTCCGGCCTGCGCTGGGTGCCGAGCAGCGCCGACCAGCCCGGCGAGCAGCACTGGCCGTACACGGAAATCTTCCAGCGGCAGATGCAGATGGAG CTGGGGCCGCACACCGAGACCCGCCTGCGTATCCACCAGCCGTCGCAGCTCTGGGTGCGCGCACCGAGCCTCGGCGAAGGCTGGCTGGCGGTGCCGCTGT
|
|
Amino Acid Sequence |
>transcriptional regulator
MSNPAALAEGEKILVVDDDARLRRLLERFLDEQGYRVRAVENTEQMDRLLSRELFQLVVLDLMLPGEDGLTACRRLREQNNQVPIIMLTAKGDEGSRIQG LELGADDYLAKPFNPRELLARIKAVLRRQAPLVPGAPAGADEVVTFGDYQLFLATRELKKGDEVHMLTTGEFAVLKALVQHAREPLTRDKLMNLARGREW DALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVPDGNARKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|