Pseudomonas aeruginosa MH19, PAMH19_RS13880
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa genome assembly PAMH19, contig MH19_contig9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCGGACGGGTGATGGTCGCCGCCAACTGCGTCGGCCAGGCCCAGCGCGCCCTCGACCTGTCGCTGCGCTGGGCGGCCGATCGCAAGCAGTTCGGCCA GCCGATCGGCAGCTACCAGGGCGTTTCCTTCAAGCTCGCCGACATGGCCACGCAGATCCGTGCCGCCGAGCTGATGACCCTGCACACCGCCTGGAAGATG GACCAGGGCACCATGACCGACGGCGAGGCCGGCATGGCCAAGCTGTTCGCCAGCGAGACCCTCGGCAAGGTCGCCGACGAAGCGGTGCAGATCTTCGGCG GCATGGGCCTGATGGATGAAGGACCGGTCGAGCGCATCTGGCGCAACGCGCGGATCGAACGGATCTGGGAGGGCACTTCGGAAATCCAGCGGCACATCGT TTCCCGCGAACTGCTGCGGCCGTTGCTGCGTTGAAGTCCTGGCTCCCCTCTTCCTCCAGGGGAGAGGGGAAGGCTGCCATGTTCCGAATCGAGAACCGAC
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| DNA Sequence for Gene |
>PAMH19_RS13880
ATGAATCGTGAAAACCTCAAGCGCCTGCTGGCACCCAGGCATCTCGCCTTCATTGGCGGCCGTGGCATGGCGCGTGCCCTGAAACGCTGTGCCGAAGGCG GTTTCGCCGGCCAGTTGTGGCTGGTCAATCCGCAGCACGCCGAACTCGAAGGCGTACCCTGCGTGGCCAGCGTCGCCGACCTGCCGTGCGGCCCGGACGC GGCGTTCGTCGCCACCAACCGCGAACTGACCCTCGACGCGGTCGCCGCGCTCGCCGCCAAAGGCGCCGGCGGGGCGATCTGCTATGCCTCCGGCTTCGCC GAAACCGGCGAACAGGGCCTGGCCGTGCAACGCCGGCTGCTGGCCGCCGCCGGCGAAATGGCGCTGCTCGGCCCGAACTGCTACGGCTTGCTCGACTACC TGCACGGCGCCGCGCTATGGCCGGTGGCACATGGCGGTCGGCAGGTGGAGCGGGGCGTCGCGGTGCTGACGCAGAGTGGCAACTTCGCCTACAACCTGTC GATGAGCGACCGTTCGCTGCCGGTGGCCTATATGGCATCGGTGGGCAACCAGGCGCAGCTGGGCATCGCCGAGCTGATGGACGTGCTGCTCGACGAGCCG CGGGTGACTGCCATCGGCCTGCATCTGGAAGGGCTGAAGAACGTCCCGGGGTTCGCCCGCGCGGCCTACAAGGCGTTGCAGAAAGGCGTGCCGGTGATCG CCCTGAAGACCGGGGTGTCGAAGATCGGCGCGGCCCTCGCGCTCAGCCACACCAGTTCCCTGGCCGGTTCCGACGCGCTCTACGACAGCCTGTTCGAGCG CCTCGGGGTGATCCGCGTGAGCGGCCCGGTGAGCTTCGTCGAAACCCTCAAGGCCGCCGCCTGCGGCCACCTGCCTGGCGGGCCGAGCCTGGTCGCGCTG GCCTGTTCCGGCGGCGACGCCGGGTTGATCGCCGATTACGCCGAGCGCAACGGCCTGGGGTTGCCGTCTTTCGACGCCGGACAGCGCGACGAACTGGCCG GGGTGCTGCCCGACTACGCCAACATCGCCAACCCGCTGGACTTCACCACCGCCATCTGGGGCGATGCCGCGGCCCTGGAGGAAATGCTCGACAGCGCTCT GCGCAGCCCTGCCGACGCCGCCCTGCTGGTGCTCGACTATCCGGGCGAGGAAACCGGCGAGCGGCCGCAGTGCGACCTGCTTCTGCAACGCTACTGCGCC GCGCTGAAGCGCCACGGCAAAGTCGGCTTCATCGCCTCGGCGTTCCCGGAACTGCTGCCGGCCCGGGCCCGCGAGCTGTTGCACGGCGAGGGCGTCGCCG CGCTGCAGGGCGTCGAGGATGGTCTCGCCGCCTGGGGACGGATCGCCCGCTACCGCCAGCGCCGCGCGGCGCTGCTGGAGCGCGGTGAGGCGGCGTTGGT GCCGATCTGCCCAGGGCCGCTGGCGGGCGACGGCTACCTGCTCGACGAGTGGCAATCCAAGCAGGCGCTGAAACCCTTCGGCCTGCCACTGCCCCAGGGG GTGCTGAGCACCCCCGGCCAGGCCCGCGAAGCGGCCCTCGACCTCGGCTTCCCGCTGGTGCTCAAGGCGGTCAGCGCCGCACTGCCGCACAAGACCGAGG CCGGTGGCGTGGCGCTCGGCCTGCGCAACGAGGCGGCGTTGGAGGCGGCATTGTTCGACATGCGCGAAAGCCTGGCCCGGCACGCGCCGCAACTGGTCTT CGAGCGTGTTTTATTGGAGCGCATGGCTGGCGCGCCGCTGGCCGAGCTGATCGTCGGGGTCAAGCGCGAGGAGGGCTTCGGCCTGGCATTGGTGATCGGT GCCGGCGGGATACTCGTGGAGCTGCTGCGCGACAGTCGCAGCCTGCTCCTGCCAACCACCGACGCGGCGATCCGCGATGCCCTGCTGAGCCTGCGCAGCG CGCCGTTGCTCAGCGGCTTCCGCGGTCGCCCGGCAGTGTGCATGGAGGCCCTGGTGGCGGCGATCCGCGCGGTCGCCGAATTCGCCTGCGAACATGCCGA GCGCTTGCTGGAGCTGGACGTCAATCCGTTGCTGGCGGATGCCGAGGGAGCGCTGGCGGTGGATGCGTTGATCCGGCTGGCCAATGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGCCGGGGGGACACGACGGCTCCCCCTCCCGCTTGTGGGAATGGGAGCAAGAGCGCTGCGGCGCGAACGGCGACTCCGATGGTCGCCGAACTGGACGAG GATATTGCCCATGCAACCACAGAAGACCCTCACCGCCGGCCAGGCCCTGGTCCGCTTGCTGGCCAACTACGGCGTGGATACCGTTTTCGGCATCCCCGGC GTGCATACCCTGGAGCTGTACCGCGGACTTCCGGGCAGCGGCATCCGCCACGTGCTGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGTTATG CGCGGGTCAGCGGCAAGCCGGGAGTGTGCTTCGTCATCACCGGGCCGGGCGTGACCAACGTCGCCACCGCCATCGGCCAGGCCTACGCCGACTCGGTGCC GCTGCTGGTGATTTCCAGCGTCAACCACAGCGCCAGCCTGGGCAAGGGCTGGGGCTGCCTGCACGAGACCCAGGACCAGCGTGCCATGACCGCGCCGATC
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| Amino Acid Sequence |
>hypothetical protein
MNRENLKRLLAPRHLAFIGGRGMARALKRCAEGGFAGQLWLVNPQHAELEGVPCVASVADLPCGPDAAFVATNRELTLDAVAALAAKGAGGAICYASGFA ETGEQGLAVQRRLLAAAGEMALLGPNCYGLLDYLHGAALWPVAHGGRQVERGVAVLTQSGNFAYNLSMSDRSLPVAYMASVGNQAQLGIAELMDVLLDEP RVTAIGLHLEGLKNVPGFARAAYKALQKGVPVIALKTGVSKIGAALALSHTSSLAGSDALYDSLFERLGVIRVSGPVSFVETLKAAACGHLPGGPSLVAL ACSGGDAGLIADYAERNGLGLPSFDAGQRDELAGVLPDYANIANPLDFTTAIWGDAAALEEMLDSALRSPADAALLVLDYPGEETGERPQCDLLLQRYCA ALKRHGKVGFIASAFPELLPARARELLHGEGVAALQGVEDGLAAWGRIARYRQRRAALLERGEAALVPICPGPLAGDGYLLDEWQSKQALKPFGLPLPQG VLSTPGQAREAALDLGFPLVLKAVSAALPHKTEAGGVALGLRNEAALEAALFDMRESLARHAPQLVFERVLLERMAGAPLAELIVGVKREEGFGLALVIG AGGILVELLRDSRSLLLPTTDAAIRDALLSLRSAPLLSGFRGRPAVCMEALVAAIRAVAEFACEHAERLLELDVNPLLADAEGALAVDALIRLANG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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