Pseudomonas aeruginosa DSM 50071, PA50071_RS27940
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa DSM 50071, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGTGCGAGGAAGGCGAGTCGCCGCGCGGCTACGTCGAGGTTCGGCACATCGGCAGCCAGGTACAGAAGATGGTGCAGGAGGCACTGGACGCCTTCGCC CGCTTCGATGCCGACCTGGCGCTGTCCGTGGCGCAGTACGACAAGACCGTCGATCGCGAGTACAAGACCGCCCTGCGCGAGCTGGTCACCTACATGATGG AAGACCCGCGGGCGATATCCCGCGTGCTCAACATCATCTGGGCCCTGCGCTCGCTGGAGCGCATCGGCGACCATGCGCGCAACATCGCCGAGCTGGTGAT CTACCTGGTTCGCGGCACCGACGTTCGCCACATCGGCCTGACCCGCATGAAGGAAGAGGTCGAGAACAACCGCGGCGAGTGATCTTCCGCAGGCAAGGCT CCCTTGACCTGGAGCCTTGTTTCTTCGCGCGACTGCAGCAAGGCTTGGCATCCTGCCAGCAGGGGAGGCTATCCTAGGCGGACCTGTCCAGGAGAAGTCG
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| DNA Sequence for Gene |
>PA50071_RS27940
ATGAGCAAAGTCAGCGCGCTAGTGGTGGATGACGCCCCCTTCATCCGAGATCTGATGAAGAAAGGGTTGCGCGACAACTTCCCCGGCCTTCATATCGAGG AGGCCGTGAACGGCCGCAAGGCCCAGCAACTGCTCAGTCGGCAGAACGTCGACCTGATCCTCTGCGATTGGGAGATGCCGGAGATGTCCGGCCTCGAACT GCTGACCTGGTGCCGTGCCCAGGAAAACCTCAAGACTACCCCGTTCATCATGGTCACCAGTCGCGGCGACAAGGAGAACGTGGTCCAGGCGATCCAGGCC GGGGTGTCGGACTACATCGGCAAGCCATTCTCCAATGACCAACTGGTGGCCAAGATCAAGAAGGCCCTGAGCCGCAGCGGCAAGCTGGAAGCCCTGGCGG CCCACGCGCCGCGCCGGGAGATCGCCAGCGGCATGGCCAACGATTCGCTGGCCGCCCTGACCGGTGGTCGCGCCGAGGTGATCAAGCCCGCCGCCAGTCC GGCAAAACCGGCCCCCGCGCCGAAGCCGGCTTCGGCTCCCCAGGCCAGCGCGCGTCCCGCCGGCAGCGGCAACCCGCTGGGGCAGGCGCAATTGCGCCTG CCGCAGAGCAGCATGCCCTGCGTGATCAAGGCGGTCAGTCTGAAGGAAGCGCAACTGGTGGTGAAGCGCGCCGACCCGTTGCCGCAGGTGCTGGAAAGCG CGGTGCTGGACCTCGAGGAAAACAGCGACGTGGCGCGCCTGAACGGCTACCTGCACGCCATCGCCGCGCTGGAGCCGAAGCCGGATAGCGATTGGCTGCT GTTGACCCTGCGTTTCGTCGACCGCGACCCGCAGAAGCTCGACTACCTGTCGCGCCTGATCGCCCGCGGAAGTACCCAGAAGCACTACGTTCCCGGCGCC TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGTTTTTTCCCGACGATCCGTTCACAGCCCGCTCGCTGTCGTCTCGCCCTGGCAATAAAGCGCTGCTAGTCTTGCCGATTCGGGATAACCAGAACGAC ACGATCCGTGCAGTCATGCTAGGGCGCCTTCTCCTTCTCTGTGGCCTGTTCGCCGCGGCAGCTCCGGCTGCGGCCCTGACCATCTACAAGTACACCGACG CCAATGGCGTGGTGACCTACTCCGACCGCGCCGTGGCCGGGGCGCAGGTGTTCGTCTTCCGCGACCGGATGGTCGAGCACCTGGAACGGGAAGTGAAGCT GGAGACGAAGAAGCACGCGGGTGGCGAGACCCTGCAGGTGCGCAACGACCTCTACGCGCCGGTCGAGGTCGAGTTGCGGATCCGCAACCCGCGCAATGCC GTTGGGGTGCCCGACGGGCCGATTCGCTGGGTGGTCCCGGCGCGCAGCCAGGTGCGCCTGGCGACCCTGGCGCCGCGCAAGGCCGGCAAGCCGATGAGCT
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| Amino Acid Sequence |
>transcriptional regulator
MSKVSALVVDDAPFIRDLMKKGLRDNFPGLHIEEAVNGRKAQQLLSRQNVDLILCDWEMPEMSGLELLTWCRAQENLKTTPFIMVTSRGDKENVVQAIQA GVSDYIGKPFSNDQLVAKIKKALSRSGKLEALAAHAPRREIASGMANDSLAALTGGRAEVIKPAASPAKPAPAPKPASAPQASARPAGSGNPLGQAQLRL PQSSMPCVIKAVSLKEAQLVVKRADPLPQVLESAVLDLEENSDVARLNGYLHAIAALEPKPDSDWLLLTLRFVDRDPQKLDYLSRLIARGSTQKHYVPGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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