Pseudomonas aeruginosa DSM 50071, PA50071_RS13090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa DSM 50071, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTAATCCTCGCCACCGGTTATGAGCGGCAGTTGCATCGTCAACTGCTGGAGCCGATGGCCGACTACCTCGGGGACTTCGAGGTCGACCGCAACTATCGTC TGATCACCGACCAGCGTTGCCAGGCGTCGATCTACATGCAGGGCTTCTGCCAGGCCAGCCATGGCCTCAGCGACACCCTGCTGTCGGTGCTGCCGGTGCG TGCCGAGGAAATCTCCGGCTCCCTGTACCAGCACCTGAAGCCCGGCACTGCGGCCCGCGCCCTGCACGAGCACGCCCTGGCCAGCTGATCGGCGCCACGC CGCCACGCCCTGTGTTGCCCGTTTCCCCGCCAGGGGATGCCCGGCACGCAGGGCGTTTTCGTTGCATGTCCCGGCCGTTCCGGCCACCACTTTGCAGAGA AACGACATCGATGGGGATGCGTACCGTACTGACCGGCCTGGCCGGCATGCTGTTGGGTTCGATGATGCCGGTCCAGGCCGATATGCCGCGGCCGACCGGG
|
|
| DNA Sequence for Gene |
>PA50071_RS13090
CTGGCCGCGGACATCCGCTGGACCGCCTATGGCGTGCCGCACATCCGGGCCAAGGATGAGCGCGGCCTGGGCTATGGCATCGGCTACGCCTACGCGCGCG ACAACGCCTGCCTGCTGGCCGAGGAGATCGTCACCGCGCGCGGCGAGCGGGCGCGCTATTTCGGCAGCGAGGGCAAGTCGTCGGCCGAGCTGGACAACCT GCCGTCCGACATCTTCTACGCCTGGCTCAACCAACCCGAGGCGCTGCAAGCCTTCTGGCAGGCGCAGACGCCCGCGGTACGCCAGTTGCTCGAAGGCTAC GCCGCCGGTTTCAACCGCTTCCTCCGCGAGGCCGACGGCAAGACCACCAGTTGCCTTGGCCAGCCCTGGCTGCGGGCCATCGCGACCGATGACCTGCTGC GCCTGACCCGGCGCCTGCTGGTCGAAGGCGGGGTCGGCCAGTTCGCCGACGCGCTGGTAGCCGCCGCGCCGCCCGGAGCGGAGAAGGTCGCCTTGAGCGG CGAGCAGGCGTTCCAGGTCGCCGAGCAGCGGCGCCAGCGCTTCCGCCTGGAGCGCGGCAGCAACGCCATTGCCGTTGGCAGCGAACGTTCGGCGGACGGC AAGGGCATGCTCCTGGCCAACCCGCACTTCCCCTGGAACGGCGCGATGCGTTTCTACCAGATGCACCTGACCATTCCCGGCCGGCTCGACGTGATGGGGG CCTCGCTGCCCGGCCTGCCGGTGGTCAACATCGGCTTCAGCCGCCACCTGGCCTGGACCCACACGGTGGATACCTCCAGCCACTTCACCCTGTATCGCCT GGCGCTGGACCCGAAGGACCCGCGGCGCTACCTGGTCGACGGTCGTTCGCTGCCGCTGGAGGAGAAGTCCGTCGCGATCGAGGTACGCGGCGCCGACGGC AAGCTGTCGCGCGTCGAGCACAAGGTCTACCAGTCGATCTACGGCCCGCTGGTGGTCTGGCCCGGCAAGCTGGACTGGAACCGCAGCGAGGCCTATGCGC TGCGTGACGCCAACCTGGAGAACACCCGGGTACTGCAACAGTGGTACTCGATCAACCAGGCCAGCGACGTCGCCGACCTGCGCCGGCGCGTCGAGGCGCT ACAGGGGATCCCCTGGGTCAACACCCTGGCCGCGGACGAGCAGGGCAACGCCCTGTACATGAACCAGTCGGTGGTGCCCTACCTGAAGCCGGAACTGATT CCCGCCTGCGCCATTCCGCAACTGGTCGCCGAAGGCCTGCCGGCCCTCCAGGGGCAGGACAGCCGCTGTGCCTGGAGCCGCGACCCGGCCGCGGCCCAGG CTGGCATCACCCCGGCGGCGCAACTGCCGGTGCTGTTGCGCAGGGACTTCGTGCAGAACTCCAACGACAGCGCCTGGCTGACCAACCCGGCGAGCCCGCT GCAGGGCTTCTCGCCCCTGGTCAGCCAGGAGAAGCCCATCGGTCCGCGGGCGCGCTACGCCCTGAGCCGGCTACAGGGCAAGCAGCCGCTGGAGGCGAAG ACGCTCGAGGAAATGGTCACCGCCAACCATGTCTTCAGCGCCGACCAGGTGCTGCCGGACCTGCTCCGCCTGTGCCGCGACAACCAGGGCGAGAATTCCC TTGCCCGTGCCTGCGCGGCCCTGGCGCAGTGGGACCGTGGCGCCAACCTCGACAGCGGCAGCGGCTTCGTCTACTTCCAGCGCTTCATGCAACGCTTCGC CGAACTCGACGGCGCGTGGAAGGAACCGTTCGATGCGCAACGTCCCCTGGATACGCCGCAAGGCATCGCCCTCGACCGGCCGCAGGTGGCGACCCAGGTG CGCCAGGCGCTGGCGGACGCGGCGGCGGAGGTGGAGAAGAGCGGGATTCCCGACGGCGCGCGCTGGGGCGACCTGCAAGTGAGCACCCGTGGCCAGGAAC GCATCGCGATTCCCGGCGGCGATGGCCATTTCGGGGTCTACAACGCGATCCAGAGCGTCCGCAAGGGCGACCACCTGGAGGTGGTCGGCGGCACCAGCTA CATCCAGCTGGTGACCTTCCCCGAGGAAGGGCCCAAGGCTCGCGGGTTGCTGGCTTTCTCCCAGTCCAGCGATCCGCGCTCGCCGCACTACCGCGACCAG ACCGAGCTGTTTTCCCGCCAGCAATGGCAGACCTTGCCGTTCAGCGACAGGCAGATCGACGCCGACCCGCAACTGCAACGGCTAAGCATTCGCGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAAGCAATGCCTATCAGATCTGATGGGAAAAAAACTGACGGTTTTTCCGCGCTCGTTCGTCTTTAACCATAGAGGCGGCCCACAGCCGCCCGGTTCCAGG GAACACGTGCAGGCAGCGAGCAGGGATGCTCGGCTTCGGCGGGGACCCGCTACCCACTCGTCCACGAAAGGAGCGTCACGATGACCCATTCGCCCGTCAA ACAGATGTTGAAGGAGGCCGGCCTGAAGATGAGCCTGGCCCGGCTGAAAGTGATCGATGCGCTCTGGGAAGCCTCGGGGGAGCAGGGCCGGGTGCCGATC CGCACCCTGCACCGGCGTCTCTCCGAAACCGGTACGCCGCTGTCCCTGGTGAGCATCCGCCAGGTCCTCGGGCGCCTGGTGGAAAGCGGCCTGGTGACCC TCGACGAACAGGATGTCTACAGCCCCGGCAAGGCTTCCTGGGGCGGTGCCGCCGGTTCCGCGGCGCCCGAGCGCCGCGCCGCGGCCAACGAGCAGCGGCT
|
|
| Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MAADIRWTAYGVPHIRAKDERGLGYGIGYAYARDNACLLAEEIVTARGERARYFGSEGKSSAELDNLPSDIFYAWLNQPEALQAFWQAQTPAVRQLLEGY AAGFNRFLREADGKTTSCLGQPWLRAIATDDLLRLTRRLLVEGGVGQFADALVAAAPPGAEKVALSGEQAFQVAEQRRQRFRLERGSNAIAVGSERSADG KGMLLANPHFPWNGAMRFYQMHLTIPGRLDVMGASLPGLPVVNIGFSRHLAWTHTVDTSSHFTLYRLALDPKDPRRYLVDGRSLPLEEKSVAIEVRGADG KLSRVEHKVYQSIYGPLVVWPGKLDWNRSEAYALRDANLENTRVLQQWYSINQASDVADLRRRVEALQGIPWVNTLAADEQGNALYMNQSVVPYLKPELI PACAIPQLVAEGLPALQGQDSRCAWSRDPAAAQAGITPAAQLPVLLRRDFVQNSNDSAWLTNPASPLQGFSPLVSQEKPIGPRARYALSRLQGKQPLEAK TLEEMVTANHVFSADQVLPDLLRLCRDNQGENSLARACAALAQWDRGANLDSGSGFVYFQRFMQRFAELDGAWKEPFDAQRPLDTPQGIALDRPQVATQV RQALADAAAEVEKSGIPDGARWGDLQVSTRGQERIAIPGGDGHFGVYNAIQSVRKGDHLEVVGGTSYIQLVTFPEEGPKARGLLAFSQSSDPRSPHYRDQ TELFSRQQWQTLPFSDRQIDADPQLQRLSIRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|