Pseudomonas aeruginosa DSM 50071, PA50071_RS09335
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa DSM 50071, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAGGACAACCAGTACCTGCTGGAGGCGCCGGCCTACCGCGCCGCCAACCGCAGTTTCAAGGACGTGTCCGAGCTGCGCCTGCTGAAATTGTCGGAAGCCG ACTATCGACGCCTGCTGCCGTTCGTCAGCGCCTTGCCCGAAGATGCGCCGCTGAACGTGAACACTGCCAGCGTGCCGGTGCTGGCCGCCATGTTCGAGAT CGATCCGGGACAGGCGGAAAACATCGTGGCGGCCCGTGGGCGAGAAGGCTTCCAGGAGAAGACTGAGTTCAGCAAGCACCTGAACGAGTTGGGATCAAAG GCAAGTAACGTCAACTTTGCCGTCGGCACCCGCTACTTCCAGGTGATCAGCGAGGTCAGCCTGGGCGACCGCCGGCAGGTGCTGGTGAGTACCTTGCAGC GGGGCAAGGACGGCAAGATACGCGTGATGGCCCGCGACATGGGGCAGGGCGGCCTGCCCATCCCGTCGACGGGCGGCGACGATTGGAAGAAGGACGAGCG
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| DNA Sequence for Gene |
>PA50071_RS09335
ATGAGTGGAGTGAGTGCGCTGTTCCTGCCGCCCGCCAGCACGGCGGGGGCCGATGGGGAACTGGCGGTATGGTGGGTGCAGGATGGCGAGTGCCGGCGCG CGCCGTTCGCCCAGGCGCTGGCGGAAATCCGTGCGCCCTGGCGGCTGTACCTGCCGGTGGAGGCGGTGACCGCCTGCGCGGTGAACCTGCCTACACAGAA GGCGCGCTGGTTGCGCCAGTCGCTGCCGTTCGCGGTGGAGGAACAACTGGCCGACGATGTCGAGCAGATGCATCTTGCCCTTGGTCCGGCGCTGGCCGAC GGCCGCCACCGGGTATTCGCCGTGCAGCGCACCTGGCTTGCCGCCTGGCTGGCGCTGGCCGAGGGCGCGGGCAAGGCGCCGGCTTCGCTGCATGTCGATG CCGATTGCCTGCCGGGCGAGGGCAGTTGCCTGTTCTGGCTGGAAGAGCGCTGGTTGCTCGGCGGCAGCGGCGCCGTACGCCTGGCCTGCGGCAGCGAGGA TTGGCCGGTACTGCGCGACAGTTGCCCGCCGCCGCAGCGGGCCTTCGCCGCGCAGGAGGTGGCGCCCCTGGAGGGGGTGGAAGTCCAGGCCCTGGCGGGC AATCCGCACGTCTGGCTGAGCGAGCAGCCGCTGGGCACCGACCTGGCCCAGGCCGAGTTCGCCGCGCGCCAGCAGAGCAGCCAGTGGCGCCGCTGGCGGC CGCTGCTGGGGTTGGTCGGGCTGTGGCTGGTATTGCAATGGGGCTTCACCCTGCTCCAGGCCTGGCAGTTGCAGCGCGAAGGCGACCGCTACGCGGCGCA GAGCGCAGAACTCTACCGCCAGTTGTTTCCCGAGGACCGCAAGCTGATCAACCTGCGCGCGCAGTTCGACCAGCACCTGGCCGACAGCGCCAGCAGCGGC GGCGAGGGCCAGTTGCTCGGCCTGCTTGGCCAGGCCGCCACGGTGATCGGCGGCGAGCCGACGGTGAGCGTCGAGCAACTGGACTTCAGCGCCGCTCGCG GCGACGTCGCCCTCCAGGTGCGGGCTCCCGGTTTCGACGTGCTGGAACGGCTGCGTTCGCGTCTCAGCGAGTCCGGGCTGGCGGTGCAGCTGGGTTCGGC CAGCCGCGATGGCTCGACGGTCAGCGCGCGCCTGGTGATAGGAGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATGAAGGTGATGACGCAATTCCACGAGCGCCTCAGGGCCCAGGCGGAAACCTCGCAGCTGGCGATCCGCTGGCGCGGGCTGCCGGCGCGGGACCGCCTG GCGCTGCTCTGGCTCGGCGCGTTCCTCCTGCTGGTGGTGCTTTACCTGGCGCTGTGGCGCCCGGCCGAGCGCCATCTGCAGTCGGCGCGGCAGTACTTCA CCGAACAGCGCGCGCTGCATGCCTACATCCAGCAGCAGGCGCCCAACGTGCGCCAGGCCGATGCCGCGGCGCCACAGGCGCAGATCGACCCGGCGGCGCT GCAGGGCATGGTCACGGCTTCGGCGGCCCAGGCCGGACTGAGTGTCGAGCGCCTCGACAACGAAGGCGAGGGCGCCGTGCAGGTGGCCCTGCAGCCGGCG CCATTCGCCAAGCTGCTGCCCTGGCTGGAGCAGTTGAACGGGCAGGGCGTGCAGGTGGCGGAGGCCGGCCTGGACCGCCAGGTCGACGGCCGGGTCTCGG
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| Amino Acid Sequence |
>general secretion pathway protein GspL
MSGVSALFLPPASTAGADGELAVWWVQDGECRRAPFAQALAEIRAPWRLYLPVEAVTACAVNLPTQKARWLRQSLPFAVEEQLADDVEQMHLALGPALAD GRHRVFAVQRTWLAAWLALAEGAGKAPASLHVDADCLPGEGSCLFWLEERWLLGGSGAVRLACGSEDWPVLRDSCPPPQRAFAAQEVAPLEGVEVQALAG NPHVWLSEQPLGTDLAQAEFAARQQSSQWRRWRPLLGLVGLWLVLQWGFTLLQAWQLQREGDRYAAQSAELYRQLFPEDRKLINLRAQFDQHLADSASSG GEGQLLGLLGQAATVIGGEPTVSVEQLDFSAARGDVALQVRAPGFDVLERLRSRLSESGLAVQLGSASRDGSTVSARLVIGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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