Pseudomonas aeruginosa DSM 50071, PA50071_RS01280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa DSM 50071, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGGAGTTAGCTCTACTTCAGGCCGCTTTGCAGTGCTGCGACTTGTAGTGGTCTACTAATCCACAGCACCAACCCACTGGAGAGGCCGAACGCTGAGATCA AACGACGCACCGACGTGGTAGGGATCTTCTGACCTGCACCCCGATTTCAGTACCACGTCAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAGACGGCAGTG AAAAAGCGTTTTACCGAAGAGCAGACTCTCGACCTCCTCAAGCAGGCGGAGGCCGGTGTGCCGGTGAAGGAACTGTGTCGCCGACACGGCTTCAGTGATG CCTCGTTCTACACCTGGCGGGCCAAGTTTGGCGGTATGACCGTGGCGGACGCCAAACGGTTGAAGGATCTTGAACTGGAAAACAGCCGATTGAAGAAGTT GCTCGCCGAGGCCCACCTCGACATCGAGTCGCTAGTCGCTAAAAGTGGTCGCCCGGGGAAAAGGGTAAGCCCGACAGCACGGCGGGAGGCGGTGCAGGAG
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| DNA Sequence for Gene |
>PA50071_RS01280
ATGCAGGCGCGAACCGGCATCTCCGAGCGTCGTGCCTGTCAGTTGATCGGGCTGTTCCGCTCGGTGTTGCGCTACCAGCCGCGAGCCAGTGTGCAAAACA CCGAGCTGCAAGCCCAACTGGTGGAACTGGCCCAAGAGCGCCGACGCTTTGGCTATCGCCGCCTGCACATCCTGCTGCGGCGTGCTGGCGTGCAGGTCAA CCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACGGCGGCGGCGCCGCCATGGCGTCGCGGTGGAGCGCGAACGTCTGAGTTTG CCGAGCGCACCAAACCAGGTTTGGTCGATGGACTTCGTCTTCGATGCACTGAGCACCGGGCGGCGGATCAAATGCCTGACGGTGGTCGATGACTTCACCA AGGAGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGCGGCTTTCGCGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGAT CCGCACCGACCAAGGGCCCGAGCTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTGGTAAGCCCACG CAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATCGCGG CCTGGCGGCGGGATTACAACGAACACCGACCGCACAGCGCGATTGGCAATCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAGCT GAAGCAGGAAAAATTAATATCAACCCCAGGGCCTGCTAACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGCGGTACTAAAACTGGGGGCAGGTCAACACTATGCTGGGAGAGTAGAAGGCAAGCCCGTAGTCTATCTCTCTGGCTTGCCTTTTGTCTGCTCGGATT TTTATTCGCTCTCAATCTCCAGATTGATTTTGAAAGTTGAGAAAGAGTTACTGCCCTCCTTGAGCGATGAGGTAATTGCTGCCCCTAGTTTTGGGTTAAG TTCGGTTGCAGAGAACTCTGATTTCTTATTGCACGGTTTCACTATGGGGGAACCGGAGTTTTCTGTGGTTTTGTCGTACCAGAAGCACTCCATTCCACTC ACGCTGTCAGTCGTTTCGAGCCAGAATATTAGTGGGAATAGCGGAAGAGCAAATTCGCTTTCGGTCTCAGTTAGGACTGCTAGTGTTCTTGGCTTCTGCT TGCTACTTTCAAAGGCATGTGATTTGGTAAACGGAGGGACGTCGTGGGCGACTTTGAAAACTCCAGTGAATTTGTCATCTTCAAATGGTTTTTGCTCCAT
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| Amino Acid Sequence |
>transposase
MQARTGISERRACQLIGLFRSVLRYQPRASVQNTELQAQLVELAQERRRFGYRRLHILLRRAGVQVNHKRIYRLYRAAGLMVKRRRRRHGVAVERERLSL PSAPNQVWSMDFVFDALSTGRRIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARFRGYPKAIRTDQGPELTGKALDQWAYQRDIKLKLIQPGKPT QNAFIESFNGKFRDECLNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGNLTPAEFAASWRTRQQQLKQEKLISTPGPAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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