Strain | Pseudomonas aeruginosa strain DSM 50071 6_395927_20.7423, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCGGCGCCAACGGCCTGGGCCTGCCGGTCAACCGCCCGCGCAGCGAGGTCAATACCGTCAACCAGGACGGCGCGCTGAACGCCGGACACAGTACCAGCG GGGTGAACTACCAGCCGAGCCGGCTCGATCCGCGCGAGGAGCAGGCCAGCGCCCGCTACGTGCGGACCCCGCTGAGCGGCACCACCCAGCAGGCGAAGAT CCAGCGCGAGCAGAACTTCAAGCAGACCGGCGAGCTGTTCCGCTCCTACGGCAAGAAGGACCAGGCCGACCTGATCGCCAGTCTCGGCGGGGCGTTGGCG ATCACCGACGACGAGAGCAAGTACATCATGCTTTCCTACTTCTACAAGGCTGACAGCGACTACGGCACGGGCCTGGCCAAGGTGGCCGGGGCCGATCTGC AGCGCGTCCGGCAACTGGCGGCGAAGCTCCAGGATTGATCGCAACCGGGGCGGCCATCCAGGCCGCCCTTCCTCTATCGGTTTGGTGGGAGATGACGACG
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DNA Sequence for Gene |
>TU83_RS22350
ATGCGAGGTTGGATTCTGGCAGGCTTGCTGCTCGCGGCGCTGGCCGCGCAAGCTGGCGAGGTGCATGGGGTCGAGGTCGAAGCGCGGTTGCGCGACTACT TCTTCGATGCCGCCCGACGCGGTGACCAGGCCATGCTGAAGGAGTTCGTCGAGGCCGGCTTCGACCTCGATGTGCAGGATGCCAAGGGCTATACCGGGCT GATCCTGGCCGCCTACCACGGCCATGGCGGAGCGGTGGAACAATTGCTGGAGGCCGGTGCCGACCCCTGCGTCCAGGATGCGCGCGGCAACACCGCCCTG ATGGGCGCCATCTTCAAGGGCGAGGTCCGCATCGCCCGGCGCCTGATCGGCGCGCAATGCAGCCCCGACCAGCGCAACGGCGCAGGGCAGACCGCGGCCA TGTACGCGGCGCTGTTCGAGCGCGAGGAGCTGCTCCAGGCGCTGTCGGCGCGCGGTGCCGACCTTGGCGCCCGCGATGCGCTGGGCAACAGCGTGGAAAG CCTGCGACGCGGCGAACTGAACGGCACTGCGGCGGCGAGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGGGGGCAATGTTCGGAGGAGGCCTGCTGGGCTAGTCTGGAGGTGTCGTATACAACGTCAGAGGAGGTCCGTCATGCCGCTCGAGCAACATCCGCTTTC CCGGGAGTTTCCGGATTTTCATGCCGAACTGAAGCAACTTCATGGCAACGACGCCCACTTCACTCGCCTGGCGGCGGACTATGAGAGCCTCGACAAGCGC ATCTATGAGGTCGAGGGCGGTCGCGAACCCCTCGACGACCTGGCGCTGCAGGGGTTGAAGCAGCAACGGGTGCAACTCAAGGACGAAATCGCCGAGAGGC TGAGGAAGGCCAACGGAAAAGGCCATTGATTCATTCACGACAACGGCATGAAAAAGGGCGCCTCCGGCGCCCTTTTTCATGTGGGCATGCTCAGAAGGCG CCGCCGAAACGGAAACTCTGTCCGACCGCGACGAAACCCAGGCCCACCAGGGTGATCGCGGCGATGTGCCAGCCCAGCTTCGGCAGGCTCTCGGCGTCCA
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Amino Acid Sequence |
>ankyrin
MRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRGDQAMLKEFVEAGFDLDVQDAKGYTGLILAAYHGHGGAVEQLLEAGADPCVQDARGNTAL MGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFEREELLQALSARGADLGARDALGNSVESLRRGELNGTAAAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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