Pseudomonas aeruginosa DSM 50071, TU83_RS21755
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain DSM 50071 6_395927_20.7423, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGTGCGACGCGGCCTACGACAAGCTGGTCAAGGCTGCCAAGCGGGTCTCCGACCAGGACAAACGCAGCGAGCTGTACAAGCAGGCCCAGCACATCCTCA AGGAGCAGGTGCCGATCACCCCGATCGCCCACTCCACCGTGTACCAGCCGATGAACAAGTCGGTGCATGACTTCAAGATCAGCCCCTTCTCGCGGAACGC CTTCTATGGCGTAGCCAACCAGCCCTGATGCCGACGCCACCCCGGTCGTGAAACGACCGGGGTGCAGAAGAACGGCACGACCCGTACTTCATTTCTTTGC TTTTCCTGCCCGTGTTCCAGAACGGCGCTGCGCGCGTTCCGCCAGGAGCGCTCGCCTCGCCGTATTCGACCGCCGCGCCCAGGCGCGGGCGAAACCGGCG CAAACCTGGTGGGTAAAACAGGTGCCATGACAACAATAAAGGGAGCAATCAGGTGATGAGATACCAACGAGTGACCGGCGCGACGCTGGGACTGGCCTTG
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| DNA Sequence for Gene |
>TU83_RS21755
ATGGCATCGGCCGCGCCAGGCTGGGCGGCGGACGAGCAGGCAACCCCGCCGACCCCGGACAATCCCAGCTACGCCGCCCAGGTGCAGAGCATCCCCAGCG TGGAGAAACCGATCAAGGGCCAGGCCGGCGCCAGCGGGCTGTTCGAGGGGCAGAGCCTGACCCTGACCACCCGCAACTTCTACTCGCGGGAAAACATGAA GGACAGCTTCACCTTCCGCATTCCCAAGGCCGGCGGCGGCTCCCAGCGCATCCACCAGCGCAACGCCTGGGTCCAGGGCACGGTGCTCAAGTACAGCTCG GGCTACACCCAGGGCAGCATCGGCTTCGGCTTCGACGTCGCAGCCTTCAACGAGATCGCCCTGGAGCGCGGCAAGGGCCGCATCGGCGGCGGCGGCAACC GGACCCTGGCGAACAGCGATGGCGAGGCGATCGGCGAGTGGTCCAAGCTGGGCGTCGCCAACATCCGCCTGCGCGCCTCGAATACCGAATTCAAGGCCGG TCGCTTCCTGGTCAACACTCCAGTGTTCAGCTATATCGACAACCGTGCCCTGCCCTCCAGCTTCACCGGCTTCGCCGTGACCAGCGAGGAGCTGGACAAC CTCAGCCTGCAGGCCGGCAGCTTCCGCAAGGTCAGCCCGCGGACCGGTTCCGGCGACGAGGACATGACCACCGAGTACGGCACCCGCCAGGTCAAGGGCG ACCGCCTGAACTACCTGGGCGGCAACTACAAGCCGCTCGACGGGCTGGAAATCTCCCTCTATGGCTCGCATTTCCAGGACGTCTGGAACCAGTACTACCT GGGCGTGACCCACGACATCGGCGACCTCGAGAACGGCATCGCCCTGCGCACCGCCTTCAACGGCTACCACACCGGCGACACCGGCGCGCGCGAGGCCGGC TACATCGACAACGACACCTGGAGCCTGGCCTTCACTCTCGGCCATCGCGCCCACGCCCTGACCCTGGCCTACCAGCAGGTCGACGGCAACGAATACTTCG ACTACGTGCACGAGACCTCGGCGATCTTCCTGGCCAACTCGATGCTGGCCGACTACAACAGCCCCAACGAGAAGTCCGCGCAGATCCGCTACGAGACCGA CTGGAGCTACTACGGGGTCCCCGGCCTGAGCACCGGCGTGTGGTACGTGAAGGGCTGGGACATCGACGGCACCCACTACGACGGCGATCGCAACGGTGCC TACGGCAACTACGCCGAGGTGCGCGCCCAGGACGGCGAGAAGCACCACGAGCTGGGCCTGATGGCGGCCTACAAGGTGCAGAACGGGCCGATCAAGGACA GCACCTTCAAGCTCACCTACATGATGCACAAGGCCAGCCAGAACCAGGTCGACGGCAGCGTCAACGAACTGCGCCTGGTCAGCACCTTCCCCTTCAACCT GCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCTGCGACAACCGGCGGCCCCGGCGACGGGGCCCACGAGGAGGACCCCATGCTCCATCCGTTGCTCCGACACCTGCCCCTGGCCCTGGCGCTATGCGCC GCCGGCGCGGCCCAGGCGAAGAACCTGGTGGTCTGCACCGAGGCCAGCCCGGAAGGCTTCGACATCGTCCAGTACACCGGCGCGGTGACCGCCGACGCCT CCGCGGAAACCGTGTTCAACCGCCTGCTCGCCTTCCGCCCCGGCACCACCGAGGTGATCCCGGGGCTGGCCGAGCGCTGGGACGTCAGCGCCGACGGACT GAGCTATACCTTCCACCTGCGCCCCGGCGTGAAATTCCATACCACCGACTACTTCAAGCCGACCCGGAGCCTGAATGCCGATGATGTGCTGTGGACCTTC CAGCGCGCCCTCGATCCGAAGCATCCCTGGCATGCCTCGGCGCTGCGCGGCTACGCCTACTTCGACGCGATGGGCATGGGCGAGCTGATCAAGTCGGTGG
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| Amino Acid Sequence |
>porin
MASAAPGWAADEQATPPTPDNPSYAAQVQSIPSVEKPIKGQAGASGLFEGQSLTLTTRNFYSRENMKDSFTFRIPKAGGGSQRIHQRNAWVQGTVLKYSS GYTQGSIGFGFDVAAFNEIALERGKGRIGGGGNRTLANSDGEAIGEWSKLGVANIRLRASNTEFKAGRFLVNTPVFSYIDNRALPSSFTGFAVTSEELDN LSLQAGSFRKVSPRTGSGDEDMTTEYGTRQVKGDRLNYLGGNYKPLDGLEISLYGSHFQDVWNQYYLGVTHDIGDLENGIALRTAFNGYHTGDTGAREAG YIDNDTWSLAFTLGHRAHALTLAYQQVDGNEYFDYVHETSAIFLANSMLADYNSPNEKSAQIRYETDWSYYGVPGLSTGVWYVKGWDIDGTHYDGDRNGA YGNYAEVRAQDGEKHHELGLMAAYKVQNGPIKDSTFKLTYMMHKASQNQVDGSVNELRLVSTFPFNLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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