Pseudomonas aeruginosa DSM 50071, TU83_RS20755
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain DSM 50071 6_395927_20.7423, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAATCGACCCCGCTGGCGCAACTGGTGTTGCCCGGCGTCCGGGTACTGACCTACGGCGAGCGGATCGCCGTGGGCAGCGATGGACAGGACCGCTCGAAC CAGGAAAAGGACCCGCGTCCGCCGCGTACCGCGGTGCTGGCGGTACCGGAGGACGGCGTGGCGCGGCTGATGCTGGCGAGCCAGGCCGGTTCGCTGCGCC TGGCCATCCGCAGCAAGGACGAAGAACTCTACCGCAGGGAGCAGGAAGGCGCGCTGCTGCAAGCGTCGCTGGGCGCGCCGAGCGCGGCGCTGAGTCTCGA CCAACTGCTGGAGCGCCGCAAACCGACGGCGCCGAGCGTGCGCAGCGCGGCTCCGCGCGTGCCGGTGGCCAACGGGGTCACGGTCTACCGTGGCAGCGCC ATGACCCATGAAGTGCCTTGAGGGGAGCCGGCATATGCATCGGAGCACCGGGATAGGCGTGTCGCGCTGGCTGGGAGGGCTGCTGGGGGTGGCGTTGGCG
|
|
| DNA Sequence for Gene |
>TU83_RS20755
CTGCCGGCACTGGCTTTGCCGCAGGGCTGCATCGAGTTGCTGGCGCAGGCGCCGCGGGTCGACGTCGTCCAGGGACAACAGCGTGACCTGCGCCTGGCGG TGCCGATCGAACGGCTGGCCATCGGCGATCCGAAGATCGCCGACGTACAGTTGCTGGATCGTCGCGGCTTCCTGGTCACCGGTAAGGAACAGGGCTCCAC CAGCCTGCTGATCTGGACCGGCTGCAGTCCCGAGCCGTTGCGCAGCCTGGTGGAGGTCGAGGGACGCGGTAGCGTCGATACCCGCGGTGCTCCAGCGTTC ACCGTCGGCGCCGCAGAGGAGCTGCCGAACCAGGTGCAGACCGATATCCGCTTCGTCGAGGTCAGCCGCAGCAAGCTGAAGCAGGCCAGCACCTCGTTCG TCCGCCGCGGCGGCAACCTCTGGGTGCTCGGTGCGCCGGGCAGCCTCGGCGACATCAAGGTCAATGCCGACGGCAGCGGCCTGGGCGGCACCTTCGGCAC CGGCAGCTCGGGATTCAACCTGATCTTCGGCGGCGGCAAGTGGTTGAGCTTCATGAATGCCCTGGAGGGCAGCGGCTTCGCCTATACCCTGGCGCGCCCG AGCCTGGTGGCGATGAGCGGGCAGAGCGCGTCGTTCCTCGCCGGCGGCGAGTTTCCGATCCCGGTGCCGAACGGCACCAACGACAACGTCACCATCGAAT ACAAGGAGTTCGGCATCCGCCTGACCCTCACCCCGACGGTGATGAACAACCGCCGCATCGCTCTCAAGGTGGCGCCGGAGGTCAGCGAACTGGACTACAG CGCCGGCATCCAGAGCGGCGGGGTGGCGGTGCCGGCACTGCGCGTCCGGCGCACCGACACCAGCGTGATGCTGGCCGACGGCGAGAGCTTCGTGATCAGC GGGCTGACCAGCAGCAACTCGGTGAGCAACGTCGACAAGTTTCCCTGGCTGGGCGACATCCCGATCCTCGGTGCGTTCTTCCGCTCGACCAAGCTGGACA AGGACGACCGCGAGCTGCTGATGATCGTCACCCCGCACCTGGTCCAGCCGCTGGCCGCCGACGCACAGTTGCCGGACCTGCCCGGCGAGGGCCTGCGGCA CTACGATCCGGGGTTCTCGCGCCTGTACTTCCTCGAGCGCGGCGAGTACGACGGCCAGCAGAACGACACCGGTCTGTCGGATTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GAGGCGCGCATGAACCAGAACTTCGTGGCGCTGACCCAGCATCCCGGCGAACTCGACTGGTTGCAGAACAGCCTGGCGTCCGCCGGCCAGGTGGTTCCGG CAGGCAGCGCCAGCCTGGAGGAGCTGCTGGCGCTGCTCGACGTCACCGCCGCCGGGGTGCTGTTCATCAGCCTCGGCAAAAGCAACCTGGTGTCCCAGGG CGCGCTGGTCGAGGGATTGGTATCGGCGCGGCCGATGCTCTCGGTGGTGGCCATCGGCGACGGCCTGGACAACCAGTTGGTGCTGGCGGCGATGCGCGCC GGCGCGCGCGACTTCATCACCTACGGCGCCCGCGCCAGCGAGCTGACCGGGCTGATCCGGCGCCTCGGCGGACGCCTGCCCAGCGTGCCGGTGAGCGCGG CGCGCCAGGGCGAGCTGCTGACCCTGGTCAGCGCCCGACCGGACGCCGACGGCGCCTTCGTCGCCTTGCACCTGGCCAAGGCGTTGCAGGAGCAGACGCC
|
|
| Amino Acid Sequence |
>secretin
MPALALPQGCIELLAQAPRVDVVQGQQRDLRLAVPIERLAIGDPKIADVQLLDRRGFLVTGKEQGSTSLLIWTGCSPEPLRSLVEVEGRGSVDTRGAPAF TVGAAEELPNQVQTDIRFVEVSRSKLKQASTSFVRRGGNLWVLGAPGSLGDIKVNADGSGLGGTFGTGSSGFNLIFGGGKWLSFMNALEGSGFAYTLARP SLVAMSGQSASFLAGGEFPIPVPNGTNDNVTIEYKEFGIRLTLTPTVMNNRRIALKVAPEVSELDYSAGIQSGGVAVPALRVRRTDTSVMLADGESFVIS GLTSSNSVSNVDKFPWLGDIPILGAFFRSTKLDKDDRELLMIVTPHLVQPLAADAQLPDLPGEGLRHYDPGFSRLYFLERGEYDGQQNDTGLSD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|