Pseudomonas aeruginosa DSM 50071, TU83_RS14505
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain DSM 50071 4_721732_20.5851, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCTCGCCCGCGAACAGCAGGTCGACCCGCTCAGCCTGACCGGCTCCTACGCCGGCGCCATGGGCCTGCCGCAATTCATGCCGAGCAGCTTCCGCGCCT ACGCGGTGGACTTCGACGGCGATGGCCACATCAATATCTGGAGTGACCCGACCGACGCCATCGGTAGCGTCGCCAGCTACTTCAAGCAGCACGGCTGGGT CACCGGCGAGCCGGTGGTCTCGGTGGCCGAGATCAACGACGAGAGCGCCGAGAGCGCGGTGACCAGGGGCGTCGACCCGACCATGAGCCTGGGCGAGCTG CGTGCCCGCGGCTGGCGCACCCACGATGCGCTGCGCGACGACCAGAAGGTCACGGCGATGCGTTTCGTCGGCGACAAGGGCATCGAGTATTGGGTCGGTT TGCCGAACTTCTACGTGATCACCCGCTATAATCGCAGCGCCATGTATGCCATGGCGGTTTATCAGCTGGCGGGCGAGATTGCCCGCGCGCGAGGTGCCCA
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| DNA Sequence for Gene |
>TU83_RS14505
TTGAGCAAGCGTGTCCGCTCCTCCCTGATCCTGCCCGCCGTCTGCGGCCTCGGGCTGGCGGCCGTGCTGTTGAGCAGTTGCTCCAGCAAGGCGCCCCAGC AGCCGGCCAGGCAGGCGGGCATTTCCGGGCCGGGCGACTATTCCCGTCCGCATCGCGACGGCGCCCCCTGGTGGGACGTCGACGTGTCGCGGATCCCCGA TGCGGTGCCGATGCCGCACAACGGTTCGGTGAAGGCCAACCCCTACACCGTGCTGGGCAAGACCTACTACCCGATGAACGATGCGCGGGCCTACCGGATG GTCGGCACCGCGTCCTGGTACGGCACCAAGTTCCACGGCCAGGCCACCGCCAACGGCGAGACCTACGACCTCTACGGCATGACCGCCGCGCACAAGACCC TGCCGTTGCCGAGCTATGTGCGGGTGACCAACCTGGACAACGGCAAGAGCGTGATCGTCCGCGTCAACGACCGCGGCCCGTTCTATTCCGACCGGGTCAT CGACCTGTCCTTCGCCGCGGCGAAGAAGCTCGGCTATGCCGAGACCGGCACCGCGCGGGTCAAGGTCGAAGGCATCGACCCGGTGCAGTGGTGGGCCCAG CGCGGCCGGCCGGCACCGATGGTCCTGGCGCAGCCCAAGCAGGCGGTGGCCCAGGCCGCTCCCGCCGCGGCGCAGACGCAGGCGGTGGCGATGGCCCAGC CGATCGAGACCTACACTCCGCCGCCGGCGCAGCACGCGGCCGCCGTGCTGCCGGTGCAGATCGACTCAAAAAAAAACGCTTCATTACCAGCCGATGGCCT GTATCTCCAGGTGGGCGCCTTCGCCAACCCGGATGCGGCGGAGCTGCTGAAGGCCAAGCTGAGCGGCGTGACGGCTGCGCCGGTGTTTATCAGCTCGGTC GTGCGCAACCAGCAGATTCTGCACCGGGTGCGGCTGGGACCGATCGGTTCGGCGGACGAGGTTAGCCGCACCCAGGACAGCATCCGCGTGGCCAACCTTG GCCAGCCGACGCTGGTACGCCCCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCCTACTCACGCAGGGAATTCCCGCAAGGGATTGTTTGACCATTGGTAGAACCAGAGAGACGGATGAACATCACCACTATCGCGAAACGCTTGTCACT GCTTGTCCTGTTCATCGCCCCTACGGCTGGCTGGGCTGCTGAATCCATGGTTCCGGCGCCGCCGCAACTGGCCGCCAAGTCGTACGTCCTGATGGACGGC GAGAGCGGCCAGGTTCTGGTCGAGAACAACGGCGACCAGCGCCTGCCGCCGGCCAGCCTGACCAAACTGATGACCGCCTACATCGCCACCAAGGAGATCG AGGCCGGCCGCATCGGCGAGAACGACCTGGTCACCGTCAGCGAACATGCCTGGCGCACCGGCGGTTCGCGGATGTTCATCAAGGTCGGCAGCCAGGTATC GGTGAGCGACCTGCTGCATGGCATCATCATCCAGTCCGGCAACGACGCCAGCGTCGCCCTGGCCGAGCATATCGCCGGCAGCGAAGACGCCTTCGCCGAC
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| Amino Acid Sequence |
>RlpA-like lipoprotein
MSKRVRSSLILPAVCGLGLAAVLLSSCSSKAPQQPARQAGISGPGDYSRPHRDGAPWWDVDVSRIPDAVPMPHNGSVKANPYTVLGKTYYPMNDARAYRM VGTASWYGTKFHGQATANGETYDLYGMTAAHKTLPLPSYVRVTNLDNGKSVIVRVNDRGPFYSDRVIDLSFAAAKKLGYAETGTARVKVEGIDPVQWWAQ RGRPAPMVLAQPKQAVAQAAPAAAQTQAVAMAQPIETYTPPPAQHAAAVLPVQIDSKKNASLPADGLYLQVGAFANPDAAELLKAKLSGVTAAPVFISSV VRNQQILHRVRLGPIGSADEVSRTQDSIRVANLGQPTLVRPD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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