Pseudomonas aeruginosa DSM 50071, TU83_RS00300
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain DSM 50071 1_1322044_19.3712, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGGTCTGCCAGTCTTCGATGAGCAGTACGACGCGCACGCGTGGGTGGGCGCTGGAGAAACCGGCCAGTGCCTCGGGCAACAGCCGTGCGGCGGGGAAGG GACCGCCGCCCAGGCGTAGCTCGCCGCTGTCGAGATTGGCCAACTGGCTCACCGCGTTGTGCAGTGCGCGATGCCCGGCCAGCAGGCGCCGAGCGTGTTC CAGCACCAGCCGGCCGTGGGCCGTGAGGGCCACGCCGCGGCTGCCGCGCTCCACCAGGGTGCAACCCAACTGTCCCTCCAGCGCCTGGATGCTGCGTGAC AGCGCCGGCTGGCTGAGATTCACCGCTTCGGCGGCGCGGGCATAGTGGCCGTGCTCGGCGAGGGCGACGAAGTGGCGGAACTGGCGTAGATCGCTCATGC GGACTCCGCATCGAATGTGGACCTGGAATGCATTGGAATTATTGCCGTGCCGCTCGGCATAGTGCCAGCCGAAGCCCACAACAATAAAACGGAGTATCCG
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| DNA Sequence for Gene |
>TU83_RS00300
ATGAGCCGTCTGCTTGCACTCCTGGCGCTCGCCCCGCTGCTCGCCGGCGCCGCCGAAACCACCGCGCCAAAACCGCCCAGTGCCTTCACCGTCGAGGCCC AGCGGCGGGTCGAAGCGGAATTGCCCTTCGCCGACCGCGCCGACTTCGAGCGCGCCGACCGCGGCCTGATCCGGCGCCCGGAGCGGTTACTCATCCGCAA CCCCGACGGCAGCGTCGCCTGGCAGCTCGGTGGCTACGACTTCCTCCTCGACGGCAAGCCTCGCGACAGCATCAATCCCAGCCTGCAACGCCAGGCCCTG CTCAATCTCAAGTACGGCTTGTTCGAGGTTGCCGAGGGTATCTACCAGGTGCGCGGCTTCGACCTGGCCAACATCACCTTCATCCGCGGCGACAGCGGCT GGATCGTGGTCGACACCCTGACCACCCCGGCCACCGCCAGGGCGGCCTACGAACTGGTCAGCCGCGAGCTGGGCGAGAGGCCGATCCGTACGGTGATCTA CAGCCACGCCCACGCCGATCACTTTGGAGGCGTGCGCGGTCTGGTAGAGCCACGGCAGGTCGCCAGCGGCGCGGTGCAGATCATCGCTCCGGCCGGCTTC ATGGAGGCGGCGATCAAGGAGAACGTCCTGGCCGGCAACGCCATGATGCGCCGCGCCACCTACCAGTACGGCACGCAACTGCCCAAGGGGCCGCAGGGGC AGGTCGACATGGCCATCGGCAAGGGATTGGCGCGCGGACCGCTGAGCCTGCTGGCGCCGACCCGCCTGATCGAAGGCGAGGGCGAGGACCTGGTGCTGGA CGGCGTGCCGTTCACCTTCCAGAACACGCCGGGTACCGAATCGCCGGCGGAGATGAACATCTGGCTGCCGCGGCAGAAGGCCCTGCTGATGGCCGAAAAC GTGGTCGGCACCCTGCACAACCTGTACACCCTGCGCGGCGCCGAGGTACGTGATGCGCTGGGCTGGAGCAAGTACATCAACCAGGCGCTGCATCGTTTCG GCAGGCAGGCCGAGGTGATGTTCGCAGTGCACAACTGGCCGCGCTGGGGCAACGCGGAGATCGTCGAGGTGCTGGAAAAGCAGCGTGACCTGTACGGCTT CCTGCACGACCAGACCCTGCACCTGGCCAACCAGGGCGTGACCATCGGCCAGGTGCACAACCGCCTGCGCCTGCCGCCCAGCCTTGACCAGGAATGGTAC GACCGCGGCTACCACGGCTCGGTCAGCCATAACGCACGGGCCGTGCTGAACCGCTACCTGGGCTACTACGACGGCAACCCGGCGAGCCTCGACCCGCTCA GCCCGGAGGACTCGGCGGGCCGCTACGTGGAATACATGGGCGGCGCCGAGCGCCTGCTGGAGCAAGCGCGGGCGTCGTACGCCAGGGGCGAGTACCGCTG GGTGGTCGAGGTGGTCAACAGGCTGGTCTTCGCCGAGCCGGATAACCGGGCCGCGCGCGAGCTGCAGGCCGACGCCCTGGAGCAGCTCGGCTACCAGGCG GAGAACGCCGGCTGGCGCAACAGCTACCTCAGCGCCGCCTACGAACTGCGCCACGGCGTACCGCGCGACCAGCCGACGATGAAGGCCGGCAGCGCCGATG CCCTGGCGGCGATGGACACCGGCCTGCTGTTCGACTATCTCGGCGTGCGCCTGGACGCCGGCGCTGCGGAGGGCAAGGCGCTGAGCATCAACCTGCGCCT GCCGGACATCGGCGAGAACTACCTGCTGGAACTGAAGAACTCGCACCTGAACAACCTGCGCGGCGTGCAGAGCGAGGACGCCGGGCAGACCGTGAGCATC GACCGCGCCGATCTCAACCGGCTGCTGCTCAAAGAGGTATCGGCGGTACGCCTGGTCTTCGAGGGCAAGCTGAAGAGTTCCGGCAATCCGCTGTTGCTGG GGCAACTGTTCGGCATGCTCGGCGACTTCGACTTCTGGTTCGATATCGTCACGCCGGCGGCGAAGTCCGAAGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGACGAAGGCGCCCGAGAGGGGCGCCTGGTCTTTTCAGTAGGCCACGGTGAAGCGCTGGCGATGATGACGGGGCTGCTCGGCCTCGTCGAGCATGGCTAC CGCCAGGTCTTCCAGGGAAATCCGGCTCTCGCCCTTGGCGTCGAACAGGACCTGGTCGCCGCCGAGGCGGAACTTGCCGCTGCGCTGGCCGGGTTCGAGG AGCATCGCCGGGCTGAGGAACACCCAGTCCAGTCGTTGCTCGCCGCGCAGTTGGTCGAGGGCGTCGGCGGCGCCGAGGGCGCCCTGCTTCCACTGCTCGG GGAATTCCGGGCTGTCCACCAGGCGCTGGCCGGGGGCGATCTCCAGGCTCCCGGCGCCGCCGAGAACCAGCAGGCGCGGCACGCCGGAGCGTTTCACGCC GTCGAGAATGGCCTGGCTGCCGGCGGCGTGGCGGGCGCGGAGGTCGGCGCTACCCCAGCCGCCGTTGAAAGCGCTGATGACCACCTCGTGGCCTGCCACG
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| Amino Acid Sequence |
>SDS hydrolase SdsA1
MSRLLALLALAPLLAGAAETTAPKPPSAFTVEAQRRVEAELPFADRADFERADRGLIRRPERLLIRNPDGSVAWQLGGYDFLLDGKPRDSINPSLQRQAL LNLKYGLFEVAEGIYQVRGFDLANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPRQVASGAVQIIAPAGF MEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPGTESPAEMNIWLPRQKALLMAEN VVGTLHNLYTLRGAEVRDALGWSKYINQALHRFGRQAEVMFAVHNWPRWGNAEIVEVLEKQRDLYGFLHDQTLHLANQGVTIGQVHNRLRLPPSLDQEWY DRGYHGSVSHNARAVLNRYLGYYDGNPASLDPLSPEDSAGRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA ENAGWRNSYLSAAYELRHGVPRDQPTMKAGSADALAAMDTGLLFDYLGVRLDAGAAEGKALSINLRLPDIGENYLLELKNSHLNNLRGVQSEDAGQTVSI DRADLNRLLLKEVSAVRLVFEGKLKSSGNPLLLGQLFGMLGDFDFWFDIVTPAAKSEG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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