Pseudomonas aeruginosa DSM 50071, TU83_RS27225
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain DSM 50071 12_107079_17.296, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTGGCAAGGAGCTGCGGCATCGACCCGTCCGGCCTGGCCGCCACCGTCGCCGAATACAACCGCCACGCCCGCGAGGGCCGCGACCCAGAGTTCGGCCGC GGCGGCACGGCATTCAACCGCAAGCAGGGCGACCCGGCGTATCCGGGGCCGAATCCCTGCGTCGCCCCCATCGAACGCGGACCGTACTACGCGGTGCAGG TCGAGCCCGGCTGCTTCGGCACCTTCGCCGGGCTGAAGACCGACGCCCAGGCCCGCGTGCTGGACGGCGGCGGGCAGCCGATCCCCGGCCTGTACGCGGC GGGCGCGGACATGGCGAGCCTGTTCGCCGGCCACTATCCCTCCGGCGGCATCAACCTGGGGCCGGCGCTGACCTTCGGCTACATCGCCGGCCGCCATATC GCCGGCGCCCTCGGCTACGAGCAGGAGCAAGCGCAGCGCGGTTGAACGTTCCAGCGGGCGCAGCGGCCTAAACAGGCAAGCTTTCCTTCGGAACCCAAGC
|
|
| DNA Sequence for Gene |
>TU83_RS27225
ATGAGCGCAGCGCCACCGGATATCCCCGCCCTGCCCGCCGGCCTCTGCTACGTCGACGACCGCCAGCCGGGCATCCGTCGACGCCGGCAGGGCAAGCGCT TCGTCTATTTCGATGCCGACGGCCAGCGCATCGGCGACGCCGAGGAGATCCGCCGGCTGGACAAGCTGGCCATTCCGCCGGCCTATCGCGAGGTCTGGAT CTGTCCCGACCCCAACGGCCATCTCCAGGCCACCGGCCGCGACGCCCGTGGGCGCAAGCAGTACCGCTACCACCCGCGCTGGCGCGAGGTACGCGATGCC GACAAGTACGAGCGCCTGCTGCGCTTCGGCCAGGCGCTGCCGGGGCTGCGCCGGCACATCGACGCCCAGTTGCGCCTGCCCGGCCTCGGTCGCGACAAGG TGGTGGCCCTGGCGGTTGCGCTGCTCGACGCCACCCTGATCCGCGTCGGCAACCACCGCTACGCCCGCGACAACCGCTCCTACGGCCTGACCACCCTGCG TACCCGGCACGTGGACGTGAACGGCAGTCGCATCCGGTTCCGCTTCAAGGGCAAGAGCGGCATCGAGCACGACGTCAGCCTGGAGCATCCGCGCCTGGCG CGGGTGCTGCGGCGCTGCCTGGAATTGCCCGGCCAGGACCTGTTGCAGTACCTGGACGAGGACGGCCAGCCGCACCGCATCGGCTCCCACGACATCAACG AGTACCTGCGCCGGCATACCGGCGAGGATTTCAGCGCCAAGGACTACCGTACCTGGGCCGGCAGCGCGCTGGCGCTGGAGCGCCTGCGGCGTGCCGAAGC CGACGGGCTTGGCGCGGTGGTGGCGGAGGTCGCCGCCGAATTGGGCAACAGCGTGGCGATCTGCCGGCAATGCTACATCCACCCGGCGATCATCGAGGCC TACCAGGCCGGGCAACTGGGCCAGCTCAGGCGCGCCCGCAAGCGCCGCTGGCTGAGTGCCGAGGAAGCGACCCTGCTGGCCTTCCTCGACACGCCCGGCT GA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCAGTTGCCCGGGTGCGGATCGATGCCGTGCCGGCGCAGCAGGCCGAGCAGGCGGCCAATCTCGGTCTGGCAGGCTTCCAGTTCCTTGCGCAGGGTGTGT TCGCGGCGCTGCTGCTCCAGCTTCACGCGTTCGAGTTCGGCGCGCGCCTCACGGCGGATCTGCCGCTCGCGCTCCTTGTCGGAATGCTCGGCGCCGAGGG CCTCTTCGGCCTTGCGCGCGCGGTATTCGCGCATCCGCTGGGCGGCCGACTTGGCCTTGCCGCTCGGCTTGGGCCCGGGTTTGCTGGCTTTCATGAACGC CTCCATCTGCGTAACGTTACGCAATCAGAATAGCGTAACGTTACGCAGATAGACAGGGTCTATGCTTAGAGCGGCGGGGCCGAGCGCAGCATCACCGACT TCAGCGCGAAGGCCGACTTGATGCCAGCCACGCCGGGAATGCAGGTCAGGGTATTGGTGAGGAACGCCTGGTAGGCGGCGAGATCCTTGACCACAACCCG
|
|
| Amino Acid Sequence |
>DNA topoisomerase
MSAAPPDIPALPAGLCYVDDRQPGIRRRRQGKRFVYFDADGQRIGDAEEIRRLDKLAIPPAYREVWICPDPNGHLQATGRDARGRKQYRYHPRWREVRDA DKYERLLRFGQALPGLRRHIDAQLRLPGLGRDKVVALAVALLDATLIRVGNHRYARDNRSYGLTTLRTRHVDVNGSRIRFRFKGKSGIEHDVSLEHPRLA RVLRRCLELPGQDLLQYLDEDGQPHRIGSHDINEYLRRHTGEDFSAKDYRTWAGSALALERLRRAEADGLGAVVAEVAAELGNSVAICRQCYIHPAIIEA YQAGQLGQLRRARKRRWLSAEEATLLAFLDTPG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|