Pseudomonas aeruginosa LESB58, PALES_56901
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGCTTGTAGCCGAGCCGTTCGTGTTCCTTGCGGATGATGTTCAGGCCGAGGTTGTGGAAGGTCGAGACGGTCAGGCCCTTGCCCTCGCCGCCGCGCAG CAGGGTGCCGACGCGCTCCTTCATCTCCCGCGCGGCCTTGTTGGTGAAGGTCACGGCGACGATGTACTGGGCGCGGATACCGCACTGCTGGACGAGATAG GCGATCTTGCGGGTGATCACGCTGGTCTTGCCGGAGCCGGCGCCAGCCAGGACCAGCAGGGGACCGCCGACGTAGTTCACGGCTTCTTGCTGCCGGGGAT TGAGTCGGGACATAGGAACAGGCCGGAAGAGAGGGTTGAAGCGGGGGCGTATTCTAACAGGCTGGCTGGCATCCGCGAGAATTAGCGTGCAAGCTGTGAC CGATCCCGAGATCGTTCACGCCATTTTGCTGTAGATTCCCTACCGCATTAGGATGATGCCGTTCGTTCTTTACGAAGATTCTTAAAACTTTGGAGGTTGC
|
|
| DNA Sequence for Gene |
>PALES_56901
TTGTCAGCGCCCGCAGAACCCTTGCGCCTGCTCCTTCTGGCAGATACGCCGGACTGGGCGCCACTGCTAGGTGAACGCCTGAGAGCGCTGGGGCCTGCCT TCTCGCTGAGCATCGTCACCACCTGGGAGGGCGCGGCCACCCTGTTCGCCGCCGAGCCCCGGGGGCTGCTCCTGGCCACGCCGGCCTGCCTGCCGCTGGG GACTCCCTGTCCCTGGCCGGTGATCCTGCTGTTGCAGCAGGAGCCGGCGCAGGCGCCGGTTGGGGTGGTCGACTGGCTGGCCGCCGAACAGCTTTCCGAG GACAGCCTGCGCCGCTGCCTGCGCTACGCGCGCGAGCGCCTGGGTTTGCAGGCGACCCTGCAACTGCTCGCCGAGCAGGATCCGCTGACCGGCATCGCCA ACCGCCAGGGCTTCCAGACCCTGCTCGCGGCGCGCCTCAGCGAATTCGACGGGCGTGGCCTGGTGCTCGGCCACCTCGACCTGGACAACTTCCGTCACGT CAACGATTCCCTCGGCCACCAGGGCGGCGACCGCCTGATCCTGCAGGTGGTCAACCGCCTGCGCGGCTTCATGGAGAACGGCGACAGCCTGGCGCGCCTG GGCAGCGACGAGTTCGCCCTGCTGCTGGACACCCGTCGCGATCCGCAACGCGCCGAGCGGGTCGCCGAACGCATCGTCGAATGCCTCGGCGAGCCCTACT GGATCGATGGCGAGAGCCTGTTGCTGGGTTGCAGCCTGGGACTCGCCCATGCCCGTGCCGACGAAGGTGCCGACCCGCTGATGTGGCATGCGCACATCGC CATGCAGCAGGCCAAGAGCCGCCAGGGTTGCACCTTCCATGTCTTCGACGAACGCATCAACCGTGGCGTGCGCAGCCTCGCCGACCTCGAAGCCGAACTG CGCCGGGCGCTGCGTCGCGACGAGCTGGAGCTGCACTACCAGCCGCGACTGTGCCTGGACAGCGGGCGCATCGTCGGCCTGGAGGCGCTGGTGCGCTGGC GCCACGGCGAGCGGGGCCTGCTCACGCCCAGCGAGTTCGTCCCGCTGGCCGAGGAGAGCGGGCTGATCGTGCCGCTCGGCTACTGGGTCATCGCCCGCGC CCTGCGCGACATGCAGTGGCTCAACGGGCGCGGCCTGGAGCCGTTGCACATGGCGGTGAACCTGTCGTTCCGCCAGTTCCAGGACAGCCAGTTGCTGCCG ACCCTGCAACGGTTGATCGAAGAGCACGGCGTCGACGCGCGCTGGCTCGAGTTCGAACTGACCGAGACCGCCGTGATGCGGCGCAGCGACCAGGTGCTGC AGACCATGCAGGCGCTCGGCCAACTGGGCGTGCGCTTTTCGCTGGACGACTTCGGCACCGGTTTCTCGTCCTTCGTCCACCTCAATAGCCTGCCGATCAC CCTGTTGAAGATCGACCGCAGCTTCGTCGGCGGCATGGACCAGCGGGCGGAAAACTTCCAACTGGTGCGGGCGATGATCAACCTGGCGCACAACCTCAAC CTGGAAGTGGTTGCCGAAGGCGTGGAGACCCTGCGCCAGCAGGAGCAGTTGCGCGATTTCGGTTGCGACCAGGTGCAGGGCTACTGGATCAGTCCGCCGC TGCCGTTGGCGGAACTGGCGCGTTTCCTGGGCATCGGCGAGCGCTCGGCGCACCGCGGCCAGCCGCTCGGCAATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCCGACGCCTCGCTGGCCGTGGCTTTCGGCAGCAACCGCGCGGTCTTCCACTCGAAGGCCAGGGTCAGGCCAATGGCCGCGCAGGCCAGGCCGCCGGC CAGCCCCCACCAGACGCCCGCGGCGCCCCAGCCGGCCGCGAACGCCAGCAGGCAGGCCAGCGGCACGCCGACCAGCCAGTAGCAGGCCAGGCCGACCAGG AAGGTGGTGCGGGCGTCCTTGAGACCGCGGATCGCGCCCATGGCGACGTTCTGGGTGCCGTCGAACAGCTCGAACCAGGCGGCGATCGCCAGCAGCGAGA CGGCCATCGCGGCCACCTCCCGGTTGGCCGGGGCGTCGCGGTCGAGGAACAGGCCGATGATGGCCTCCGGCATCCACCAGAAGAGCCCGGCGAAGAGCAG CATGCACAGCGCGCCGAAGCCGATGCCGACACGCCCGGCGCGGCGTGCTTCGAGCAGGCGGCCGGCGCCGAAATGCTGGCCGATGCGGTAGGTGGTGGCG
|
|
| Amino Acid Sequence |
>putative signal transduction protein
MSAPAEPLRLLLLADTPDWAPLLGERLRALGPAFSLSIVTTWEGAATLFAAEPRGLLLATPACLPLGTPCPWPVILLLQQEPAQAPVGVVDWLAAEQLSE DSLRRCLRYARERLGLQATLQLLAEQDPLTGIANRQGFQTLLAARLSEFDGRGLVLGHLDLDNFRHVNDSLGHQGGDRLILQVVNRLRGFMENGDSLARL GSDEFALLLDTRRDPQRAERVAERIVECLGEPYWIDGESLLLGCSLGLAHARADEGADPLMWHAHIAMQQAKSRQGCTFHVFDERINRGVRSLADLEAEL RRALRRDELELHYQPRLCLDSGRIVGLEALVRWRHGERGLLTPSEFVPLAEESGLIVPLGYWVIARALRDMQWLNGRGLEPLHMAVNLSFRQFQDSQLLP TLQRLIEEHGVDARWLEFELTETAVMRRSDQVLQTMQALGQLGVRFSLDDFGTGFSSFVHLNSLPITLLKIDRSFVGGMDQRAENFQLVRAMINLAHNLN LEVVAEGVETLRQQEQLRDFGCDQVQGYWISPPLPLAELARFLGIGERSAHRGQPLGN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|