Pseudomonas aeruginosa LESB58, PALES_56611 (hcpB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CAACATCGAGCAGAACAGCATCATCAAGGTGTTCTCCATCGCTGCCGTACTGTTCCTGCCGCCGACCCTGGTGGGCACGGTCTACGGCATGAACTTCAAG GACATGCCCGAGCTGGACTGGTCCATCGGCTATCCGATGGCGCTGGGGATGATGGTGGTATCGGCGATCCTTCCGTACCTCTGGTTCAAGTTCAAGAACT GGCTCTGAGGCACTCGGCAGGTGTGCAACTTTTTGCTGGATAACTTCGGGAAAAGCTGTGGATACAACGCCGGGGCCAAGGTCTGGCGGGGTCTTCGATG AAGTGAGCAAGTTCTTGCATAGCACTGTGCAACAACTTGCTCACTTTTTCGGGGTAAACCCAGGGGAAAGCGTTCGTGCGGGCCGGGAGATTCTTCAAGA GTTTGATTTAAAAGGTAAATATTTTATTGGCACGAAGCTTGTTGGGTAGCTGCCGCACCAGGACATGTCGTCCCGGCTACCACTGACAAGGAATGCATCC
DNA Sequence for Gene
>PALES_56611 |hcpB
ATGGCAACCCCCGCCTATATGTCCATCACCGGCACCAAGCAGGGCCTGATCACCGCCGGCGCCTTCACCGAGGATTCGGTCGGCAACACCTACCAGGAAG GCCACGAGGACCAGGTGATGGTCCAGGGCTTCAACCACGAAGTGATCATCCCGCGCGACCCGCAGTCCGGCCAGCCGACCGGCCAGCGCGTGCACAAGCC GGTGGTCATCACCAAGGTCTTCGACAAGGCCTCGCCGCTGCTGCTGGCCGCCCTGACCTCCGGCGAGCGCCTGACCAAGGTCGAGATCCAGTGGTACCGC ACCTCCGCCGCCGGCACCCAGGAGCACTACTACACCACCGTCCTGGAAGACGCGATCATCGTCGACATCAAGGACTACATGCACAACTGCCAGGACCCGG GCAACGCCCACTTCACCCACCTGGAAGACGTGCACTTCACCTACCGCAAGATCACCTGGACCCACGAAGTCTCCGGCACCTCCGGCTCCGACGACTGGCG CTCCCCGGTCGCCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCGACCGCCGCACGCGGCCAGCCTCGCTGGCCGTCGTGCCCTCGATGACCCACAGCGCCGTGGCCAGGAAAGCCCGCGCCGGGTCGATGCCGCTTTG TTTGTTGTAGGCAGCTTCCGATCGAGCCTGCGCGCCCTTGTCTCGCCCGCGCCAGGCAGGACAATCGAATCGGTCGCCTGCGCCAGTGAGGGACAACGGA TGTTCGCAGCAGCCAACCAGACCCATTTCAGCCTCGCCATCGACGGCCTCGCCCTCGACCTGCAGGTGCTCTCCTTCAGCGGCCGCGAAGCCATCAGCCA GCCGTTCGCCTTCGACCTGGAGCTGGTCGGCGAACGCCCCGTGCCGGACCTCGAAAGCCTGCTGCACAAACCCGCCTTCCTTACCCTCGGGCCCGCCGGC AACGGTATCCACGGCCTGGTGCGCAGCGCCGGACAGGGCGACTCGGGCAAGCGCCTGACCCGCTACCGCATCACCCTCGTCCCGCAACTGGCCTACCTCG
Amino Acid Sequence
>secreted protein Hcp
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYR TSAAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSPVAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site