Pseudomonas aeruginosa LESB58, PALES_55541 (rmlD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| PseudoCAP | Lipopolysaccharide biosynthesis |
ECO:0000037
not_recorded |
|||
| PseudoCAP | Nucleotide sugars metabolism |
ECO:0000037
not_recorded |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.90.25.10 | - | - | - | 159 | 286 | 7.2E-106 |
| Gene3D | G3DSA:3.40.50.720 | - | - | - | 4 | 283 | 7.2E-106 |
| CDD | cd05254 | dTDP_HR_like_SDR_e | - | - | 3 | 286 | 2.99302E-97 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 1 | 296 | 2.34E-95 |
| Pfam | PF04321 | RmlD substrate binding domain | IPR029903 | RmlD-like substrate binding domain | 3 | 296 | 4.9E-111 |
| PANTHER | PTHR10491 | DTDP-4-DEHYDRORHAMNOSE REDUCTASE | IPR005913 | dTDP-4-dehydrorhamnose reductase family | 2 | 297 | 2.5E-66 |
| NCBIfam | TIGR01214 | JCVI: dTDP-4-dehydrorhamnose reductase | IPR005913 | dTDP-4-dehydrorhamnose reductase family | 3 | 295 | 1.3E-114 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.