Pseudomonas aeruginosa LESB58, PALES_53001
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAACTTTAGCCCTCCTTTCCGTTTTTATCTTTGTTATTGGAAATCAGTCATTTAGGCATTTCTCCGAATCCCCTTCGGAGAGCTACAGCCCAGGCTTCAC AAGGCCTGAACCGTTCCTAGGAATAACTCTACAACGATATTGAAGCGGTTAGAAACTGCACGTCACTGGTGCGTTCCACGCACTAATTGAGGTCCTCTTT TTCAATGAAAGTGCAGGACAGAGCGGTTTTTAAAATTAATATGAACATGAACTTCCCGCAATTCGGTACTTGGCGGAAAAAGTCGATTCGAATACGACAT GAACATATCCGTTAGCGACGCCACGTTCGGCGCAAAACCCTGTGACGGATTCGTCATAAGCCAGCGAATGCTCTATCGCGAGACTTGCCGGCAGTAATAA GCGTCGCGCGGCACTCCGGCAAGCGAGCTTTCCTCCCCACGTCATTCCGTTTATTCATATAACGCGTTCCGCCCGCTCCACCCGCGCCAGGAAACCCGCC
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| DNA Sequence for Gene |
>PALES_53001
ATGCTGAACAAACGCCGCCTGCCGTCGATGACCGCCCTGCAATGCTTCGAAGCGGTAGCCCGGCACCTGAGCTTCACCCGCGCCGCCGAAGAGTTGAGCC TGACCCAGAGCGCCATGAGCAAACAGGTCGCGCAACTCGAGGAGCAACTGCAGCACGCCCTGTTCCGCCGGGTGCGCAAGCGCTTGCAACTGACCCCGGC CGGCGAGCTGTACCTGGCCGAGGTACGACGCATCCTGCAACAGGTAGAGCTGTCCACCCGCTTCCTGCTTTCCTACGGCGGCGAGACCGAAGTGCTGCGA GTGGCGACCCCGCCGACCTTCGGCGCGCGCTGGCTGATCCCGCAACTGAACGGCTGGCGCCACCGCCACCCGAACATCCACCTCGACCTGCGCCAGGAAC TGGAACCGGACGACCTGCGCCAGGGCCATTGCGACCTGGCGTTCTTCTTCGGCCCCGGCACCCTGCCGGGCGCCGAGTGCATCCGCCTGTTCGGCGAACA ACTGGTGGCGGTCTGCGCGCCATCCCTGTTGCCGGCCGGCGGACTGGACGAACCGACCCAACTGGCGGAGCTGGTGCTGCTGCAGAACGCCAGCCGCGCG GAGGCCTGGCACGACTGGTTCGCCAGCCTGGAGCGAAATTGCCAGGGTTGCTACCACGGTCCACGCTTCGACACCTTCTACATGTGCATCCGCGCCGCCC AGGCCGGTTGCGGGGTAGCCCTGCTACCGCGCTTCCTGGTCGAGGAGGAACTCGCCGAAGGCAAGCTGGCGATCGCCTGGCCGCACGCCCTGCCCAGCCA GGAGGCCTACTACCTGGCCTATCCCGAGCATGCCGCGGAAGTCCCCAAGGTGCGCCATTTCATCGAGTGGATGGTAGAGCGCCTGGAGCAGGAGCAACCC TCAGCGGGCCCCCGCCAGACGCGCCACGGCCCGGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGTTTCCGCTGCGCGGAACCATCTTTACTCTCACTCGGTTCACCTCGGAACGTCCCATGCTCACTGGCGTCACGGTTCGAATCCGCCTGCTGGTCCTGGC GCTGCTACCGCTGACGATGCTCGTCACGGTCATCGCGATGGCGCTGGCCAACGCCAGTCGACTCGATGCCAGCTTCCAGGACCTTTTCAACAACCGGATG AAGCCCATCAGCCAGCTCAAGATCGTCGCCGACGCCGTTGCGGTCAGCGTGGTCGACGCCCTGCACAAGTACCGTGCGGGGGTCTTCGATGAAGAGCGCC TGCAGCAGGAGTTGAGTGGGGCGCTGTCGCGCATCGAGAAGTCGTGGGCCGACTATTCCGCAGACCACCGGACTGCCGCCGAGAAGGAAATCATCGAGTC GCTGGTCCCCACCCTGGAACGGGTCAAGCGGATGACCCTGGCATACGGCGAGCAGGCCAGGGCCGGAAGCCTGCGAAACGTCGAGGCCGGCACGTTCAAT
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| Amino Acid Sequence |
>putative transcriptional regulator
MLNKRRLPSMTALQCFEAVARHLSFTRAAEELSLTQSAMSKQVAQLEEQLQHALFRRVRKRLQLTPAGELYLAEVRRILQQVELSTRFLLSYGGETEVLR VATPPTFGARWLIPQLNGWRHRHPNIHLDLRQELEPDDLRQGHCDLAFFFGPGTLPGAECIRLFGEQLVAVCAPSLLPAGGLDEPTQLAELVLLQNASRA EAWHDWFASLERNCQGCYHGPRFDTFYMCIRAAQAGCGVALLPRFLVEEELAEGKLAIAWPHALPSQEAYYLAYPEHAAEVPKVRHFIEWMVERLEQEQP SAGPRQTRHGPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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