Pseudomonas aeruginosa LESB58, PALES_51271 (truB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESB58 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGATGGCGAGTGCGTAACCACAGCGCCCGGGCCGGCTTCCAGCTGTCCCGGGCGTTTGTCGCTTTTTTTTCCAGTGACCGGGTGTCGCTGGAGGCAGGTT GAAAAATGGCAAAAGACTACAGCCGTACCCAGCGTATCGGCGATCAGATGCAACGCGAACTGGCTCAACTGATCCAGCGCGAGATCAAGGACCCGCGCCT GGGCCTGGTCACCATCACCGGTGTCGAGGTCAGCCGCGACGTGGCGCACGCCAAGGTGTTCATCACCGTCATGGGCCAGGACGATGCCGGCAAGATCGCC CTGAACATGGAAATCCTCAACGACGCCGCCGGCTACCTGCGCATGCTGCTGGGCAAGTCGATGAAGCTGCGCAGCGTGCCGCAACTGCATTTCCACTACG ACGAAAGCATCCGCCGCGGCGCCGAGCTGTCGGCTCTGATCGAGCGTGCGGTGGCCGAAGACGGCCGCCGCCACGGCGACGACGAGACCGAGGACTGAGC
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| DNA Sequence for Gene |
>PALES_51271
|truB
GTGGCCCAGGTGAAGCGTATCCGCCGCTCCATCAGCGGCATCCTGGTGCTCGACAAGCCGCGCGGCATGAGTTCCAACCAGGCACTGCAGAAAGTCCGCT GGCTGCTCAATGCCGAGAAGGCCGGCCACACCGGCAGCCTCGACCCACTGGCCACCGGGGTGCTGCCGCTGTGCTTCGGCGAGGCGACCAAGTTCTCCCA GTATCTTCTCGATGCCGACAAGGGTTACGAGACGGTGATGCGCATGGGCATCACCACCACCACCGGCGACGCCGAGGGCGAACTGCTCGCCGAGCGGGAC GTGACCGTCGGTCGGGACGATCTCGAACAGGCCCTGCCGCGCTTCCGTGGCGACATAGAGCAGGTGCCGCCGATGTACTCGGCGCTGAAGAAAGACGGAC AGCCGCTGTACAAGCTCGCCCGTGCAGGAGAGGTAGTGGAGCGCGAGGCGCGTTCTGTTACTATTACGCGCCTGGATTTGCTCTCCTTCGAGCCGCCCTG TGCGACCCTGGCCGTTTCCTGCAGCAAAGGCACCTACGTGCGTACGCTGGTGGAAGATCTCGGCCAGGTCCTGGGCTGCGGCGCGCACGTCGCGGCACTG CGGCGGACCCAGGCCGGGCCGTTCGCCCTGGCCCAGGCGATCACCCTCGAGACGCTCGAACGCGTGCATGCCGAAGGTGGTCCGGAAGCGCTGGACCAAT TCCTGATGCCGGAAGACAGCGGCCTGTTGCATTGGCCGGTGTTGCAGTTGTCCGAGCACAGTGCGTACTACTGGCTGCACGGGCAGCCGGTGCGGGCCCC AGAAGCGCCGAAGTTCGGCTGGCTGCGGGTGCAGGATCACACAGGTCGTTTCATCGGTATCGGTGAAGTGACCGACGACGGGCGTATCGCCCCGCGTCGA CTGATTCGGTCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACCGATACGAGGGTGGCTGTCAGCAGGCACGGTCATTCCTCCTTTTAAAACACGGGAAGCGATTCCCGGCCTGTTCACTCAGAGGAAGCCCATCATGGC ACTGAGCGTTGAAGAAAAAGCGCAGATCGTTAACGAATACAAGCAAGCTGAAGGCGACACCGGTTCCCCGGAAGTGCAGGTAGCCCTGCTGTCCGCCAAC ATCAACAAGCTGCAGGATCACTTCAAGGCCAACGGCAAGGATCACCATTCCCGCCGTGGTCTGATCCGTATGGTTAACCAGCGCCGTAAGCTGCTGGACT ACCTGAAGGGCAAAGACGTGTCTCGCTACACTGCCCTGATCGGCCGTCTGGGTCTGCGTCGCTAAGCGACGCCGGTCGGCAGCTTGAAGCAAGGAGCTGG AAGTCTGGCGTCGATACCCGCACACGAGGCGGGTATCGGCGTCGGGCTTCCAGCTTCGCGCTTTCTAGGAATCGATTCGGGTCCGACTCCCGGCATTCCA
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| Amino Acid Sequence |
>tRNA pseudouridine 55 synthase
MAQVKRIRRSISGILVLDKPRGMSSNQALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFGEATKFSQYLLDADKGYETVMRMGITTTTGDAEGELLAERD VTVGRDDLEQALPRFRGDIEQVPPMYSALKKDGQPLYKLARAGEVVEREARSVTITRLDLLSFEPPCATLAVSCSKGTYVRTLVEDLGQVLGCGAHVAAL RRTQAGPFALAQAITLETLERVHAEGGPEALDQFLMPEDSGLLHWPVLQLSEHSAYYWLHGQPVRAPEAPKFGWLRVQDHTGRFIGIGEVTDDGRIAPRR LIRS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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