Pseudomonas aeruginosa 2192, PA2G_02979

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009276 Gram-negative-bacterium-type cell wall
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3542
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16797016
Biological Process GO:0042121 alginic acid biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3542
 ECO:0000249
sequence similarity evidence used in automatic assertion		 18524915
Biological Process GO:0042121 alginic acid biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3542
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16797016
Biological Process GO:0042710 biofilm formation
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3542
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16797016
Molecular Function GO:0004467 long-chain fatty acid-CoA ligase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3542
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16797016
Molecular Function GO:0035438 cyclic-di-GMP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07238
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other 2192 genes in this class
Secreted Factors (toxins, enzymes, alginate) Other 2192 genes in this class
Cell wall / LPS / capsule Other 2192 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF07238 PilZ domain IPR009875 PilZ domain 16 115 2.2E-11
Gene3D G3DSA:2.40.10.220 predicted glycosyltransferase like domains - - 12 122 1.5E-35
PANTHER PTHR30386 MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP - - 259 370 2.5E-19
Pfam PF13437 HlyD family secretion protein - - 262 357 1.0E-9
SUPERFAMILY SSF141371 PilZ domain-like - - 10 124 2.35E-10
Gene3D G3DSA:2.40.50.100 - - - 198 292 3.9E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.