Pseudomonas aeruginosa Pae_CF67.11p, ACO98_RS03035
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Pae_CF67.11p CF67.11p_contig_3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTTTCTTCGTCTTCCATGAAGCCTTCGACTATTTCGAGGAAGCCTACGGGTTGCGCCATACCGGCGTGTTCGCGGTATCCGCGGAGGTCCAGCCGGGA GCACGCCATGTCGCCGCCATGCGCGCCCAACTGAAGGCCGCCGGTCCGGCCTGCATCTTCAGCGAGCCGCCGCTTCGACCGCGGCTGGCCGACACCCTCA GCGAAGGCCTGCCGGTGCGCCTGGCCGAACTGGACGACCTGGGCGTGAACGTGAGCGTGGACGCCAACGGCTATGAGAATCTTCTGAACAACCTGGCAGG CGAATTTGCCGGCTGTCTGGAAAAGCTCTGAAAACCCGTGACTGATGGCCGCGCCCTCTTGCGCGCGGCGTCCCGATGACTAAGGTTGTCTGTTGCTGCC TGACACAAGATATTGATTCCCGTCAGGTACGGATAACTAGATGTTGCGTACGGTGGCCGGCTTCGGACGCCCCAACAACCATCGGGAGGTTAATCAGCGG
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| DNA Sequence for Gene |
>ACO98_RS03035
ATGGCCAAGACAGACGCACGCAGTCCCCGCACCGAACGCGGGACCATCGCCCTGCAGGACGCGTCGCAGGATATCTGGGACAAGAAGTACCGGCTCAAGA GCAAGGACGGTACGCCGGTGGATGCCAGCGTCGACGGTACCTGGCAACGCGTCGCCCGCGCCCTTGCCGATGTCGAGGACAAGGCCTCCCGCGAACACTG GTACGGGCGCTTCCTCTGGGCCCTGCGCAACGGCGCCATCCCGGCCGGCCGGATCATCTCCAACGCCGGCGCCCTGGGGCACAAGCCGGCCACCTCGACT ATCAACTGCACCGTGTCCGGAACCATCCAGGACTCCATGGACAACATCCTCGAGAAAGTCCACGAGGCCGGCCTGACGCTCAAGGCCGGCTGCGGCATCG GCTATGAGTTCAGCACCCTGCGCCCGCGCGGCGCCTACGTTTCCGGTGCCGGTGCCTACACCAGCGGGCCGCTGTCGTTCATGGACATCTACGACAAGAT GTGCTTCACCGTCAGCTCCGCCGGCGGCCGCCGCGGCGCGCAGATGGGCACCTTCGATGTCAGCCACCCGGACGTCCGCGAATTCATCCGCGCCAAGCGC GAGGACGGGCGCTTGCGCCAGTTCAACCTGAGCCTGCTGATCACCGACCAGTTCATGCAGGCGGTGGAACAGGACGCCGACTGGCCGCTGGTATTCCCGG TGCACGTGAAGGAGCGCGACGAGATCGACCTCGACGACCCCAACGCGGTGGTCTGGCGCGAATGGCCGATCCAGGACGACTACGTCCAGCGCGCCGACGG GCTGGTCGCCTGCAAGGTCTACGGCCAGGTCCGCGCCCGCCACCTGTGGGACATGATCATGGTCTCCACCTACGACTATGCGGAGCCGGGCTTCATCCTC ATCGACCGGGTCAACGAACTGAACAACAACTGGTGGTGCGAGGCGATCCGCGCCACCAACCCCTGCGGCGAGCAGCCTCTGCCGCCGTACGGCTCGTGCC TGCTCGGCTCGGTCAACCTCACCTGCTTCGTCGAGCAGCCATTTGGCGACGAGGCGCGCTTCGACTGGGACCGTTTCCGCGAAGTGGTGCGGGTGTTTAC CCGGATGCTCGACAACGTGGTGGAAATCAACGGCCTGCCGCTGGAACAGCAACGCCAGGAAATCCTTGGCAAGCGCCGGCATGGCATGGGCTTCCTCGGC CTGGGCTCGACCCTGACCCTGCTCAAGCTGCGCTACGGCAGTCCCGAGGCCTGCGTATTCACCGAGGAAGTGGCGCGGGAAATGGCCCTGGTGGGCTGGG AAGTGGCCCTGGAGCTGGCCAGGGAGAAGGGCCCGGCGCCGATCCTGGCGCAGGACTACGAAGTCACTGCGGAAATGCTTCGCAAGCGTCCGGAAATGGC CGCCGATGGCTATAAGGCCGGCGACCGCATCCGCGGCAGCGTGCTTCACGCCAAGTATTCCCGCTACATGCAGCGGGTCGCCGAACATGCTCCGGAACTG ATCGAGGCGTTGGCTGAAACCGGCGCGCGCTTCACCCACCACAGCTCCATCGCGCCGACCGGGACCATCAGCCTGAGCCTGGCCAATAATGCCTCCAACG GTATCGAGCCGAGCTTCGCCCACCATTATTCGCGCAACCTGATCCGCGAAGGCCGCAAGACCAAGGAAAAGGTCGAGGTCTACAGCTACGAGCTGCTGGC ATACCGGACCCTGGTCAACGCCCAGGCCCTGCCGGACAGCGACGACCCGGCGCGACGCCTGCCGGACTACTTCATCACCGCCGACAGCGTCACCCCGGCG CAGCACGTGGACATCCAGGCGGCGGCGCAGAAGTGGGTCGATTCGTCGATCTCCAAGACCGCCAACGTGCCCACCGACTACCCGTTCGAGGACTTCAAGG ACATCTACCGCTACGCCTGGCACCAGGGACTCAAGGGCTGCACCACCTTCCGCTTCAATCCCGAGGCGTTCCAGGGCGTGCTGGTCAAGGAGTCCGACCT GGAGAAGACCCGCTACCGCTTCGAACTGGAGGACGGCAGCGTGGTGGAGTTCAAGGGCAACGAGCAGGTCGAGTACGACGGTGAGATCCATACCGCCGCC AACCTCTTCGACGCCTTGAAAGAAGGCTATTACGGCAAGTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCGGGGGAATCGATATGTCAGCAGTCAAGATCACGCAGAAGATCAAGGGCTTCAAGGTCGTCAACGAAGCCGAGGAGCAGGCCCTTGCCGCCGCCGCG GAAGCCGCGTCGGTGGTGCAGATGGACGAGACCCTGGAGCGCCCGGATACCCTGATCGGCGCCACCTACAAGATCAAGTCGCCGCTGTTCGAGCACGCGC TCTACGTGACCATCAACGACATGGTCCTCAATGCGGGCACGGCGCACGAGCAGCGGCGTCCCTTCGAGATCTTCATCAACTCGAAGAACATGGATCATTT CCAGTGGATCGTCGCACTTACCCGCATCATGTCCGCGGTTTTCCGCAAGGGCGGCGACTGTACCTTCCTTGTCGAGGAACTCAAGGCGGTATTCGACCCG CGCGGGGGCTACCTGAAGAAAGGCGGCATCTACATGCCTTCCATCGTCGCCGAGATCGGCGGCGTGCTGGAGCGCCACCTGACGGCCATCGGCTTGTTGC
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| Amino Acid Sequence |
>NrdJa
MAKTDARSPRTERGTIALQDASQDIWDKKYRLKSKDGTPVDASVDGTWQRVARALADVEDKASREHWYGRFLWALRNGAIPAGRIISNAGALGHKPATST INCTVSGTIQDSMDNILEKVHEAGLTLKAGCGIGYEFSTLRPRGAYVSGAGAYTSGPLSFMDIYDKMCFTVSSAGGRRGAQMGTFDVSHPDVREFIRAKR EDGRLRQFNLSLLITDQFMQAVEQDADWPLVFPVHVKERDEIDLDDPNAVVWREWPIQDDYVQRADGLVACKVYGQVRARHLWDMIMVSTYDYAEPGFIL IDRVNELNNNWWCEAIRATNPCGEQPLPPYGSCLLGSVNLTCFVEQPFGDEARFDWDRFREVVRVFTRMLDNVVEINGLPLEQQRQEILGKRRHGMGFLG LGSTLTLLKLRYGSPEACVFTEEVAREMALVGWEVALELAREKGPAPILAQDYEVTAEMLRKRPEMAADGYKAGDRIRGSVLHAKYSRYMQRVAEHAPEL IEALAETGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYSRNLIREGRKTKEKVEVYSYELLAYRTLVNAQALPDSDDPARRLPDYFITADSVTPA QHVDIQAAAQKWVDSSISKTANVPTDYPFEDFKDIYRYAWHQGLKGCTTFRFNPEAFQGVLVKESDLEKTRYRFELEDGSVVEFKGNEQVEYDGEIHTAA NLFDALKEGYYGKY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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