Pseudomonas aeruginosa Pae_CF67.11p, ACO98_RS16905
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Pae_CF67.11p CF67.11p_contig_16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTCGGCGACCATGGTGAACTCGACCGCACCGATGCCGCCCTTCTCCACCGGCGTGCTGCGCCAGGCGTGATGGGTGAACTGCGAGTCGATGGAGACACC GACCACCTCGACGCCCAGCTCGCGGAACTTATCCATGCGGTTGTTGTGGGCGATGATTTCCGAGGGGCAGACGAAAGTGAAGTCGAGCGGCCAGAAGAAC AGTACGACGTACTTGCCGCGCAGGCTGGAAAGCTGGAAGGCATCGACGATGGAACCGTCGCCGAGGACCGCGGCGGCAGTGAAATCGGGGGCTTGCTTGT TGACCAGTACGCTCATCGCGAGGCTCCTAGAAGGTTGGGTTGCGCCCGGCGACGCCAGGCTCCCGGAAGAATATGCAGCGCAGGTTACCCAGCCACGACG ATGCATTGAAATGTCGAATTTCAATTCGCACGATAGAGTCAGCCTATGCTCTCAACCTGCGGCTAGACTCATGCTGTCGCCCATTACCCGTCCTCACCGC
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| DNA Sequence for Gene |
>ACO98_RS16905
ATGCCCCTACGCACACGCCTGCTCTGGCTGTTCCTGCCGTTGCTGGCCGCCAGTCTCGGCGGTATCTGGCTCTTGTCGGAAAGCATCCTGCTGAGCCGTT TCGACCGAGAGGACCAGCAACGCCTGCAAGAGGGCGCCACCGTCCTGCACAACCGGCTGGACTTCGAGTTGAAGCGCCACCTGGACATCGTTCGCACCTA CGCCTGGTGGGATGCCAGCTACGACTTCATCCAGCGCCCCAACGAGACCTTCGAACAGGAAAACCTCGACCACGAGATGCTCGACGACCTGGGATTCGAC TTCGTCCTGTTCCTCGACGACCGGGGTCACCTGCAACTGAAGCAGTGGTCCCCGCCCGCGCCCGACCAGCGCGTGCTCTTCGGCGCCCCCTCGGCGAGCG ACCAGGCCCTGCTCGAGGCACTGCAGCAACGCGCCATCCGCCTCGGCGCGCTGGACTTTCGCGGACGCACCGACCACAGCCTGAGCGAGCTGCTGCTGGT CGACAACCTGCCGACCCTGCTGGTCAGCGTGCCTATCAGCAACAACCAGGGTAGCGCGCCGGCGAAGGGCGCGATCCTCGCCGGCTACTTCCTCGACCGG GAACGCCTGGCCAACCTCCGCGAACAGATGCAGGCCGACCTGCAACCGATGCCCAACATCGCCACCGACTCCACCTGGAAGCCGCTGCGCAGCCGCAGCG GCAGTACCCACAACCAGGCCCTGCTCAGCCCACGGCGGTTCATCGGCGAACATGTCCAGCAGGTCTCGGTGCAGTACCTGAGTTCCAGCGGCGAGCCGCA GCTGCGCTTCGACATCACCAAGAAACGCCTGCTCTACATCCAGGGCGAGAAGGCCATCAACTTCTTCCTCGGCGCCTCCCTGCTGGTCGCGCTGGGCGCT TTCCTGGTCGGCTACCTGGCCCTGGAGCTGTGGGTCCTGCGCCGGGTCCAACGGCTCAACCGGGAGGTCGCCGAAGTCGGACGCAACGCCCACTCGATAC GCCTGAGCGACTTCGGCAACGACGAGCTGGGACAACTGGCGGGCGAGATGAACCAGATGCTCGAGCGCCTGGAACACAGCGAGGCGCGCGACCGGGCGAT CCTCCAGTCGATGCGCGACGGCTACTTCGAAATGGACGTCGACGGCGTGATCCTCACCGTCAACCCCGCGCTCTACCAACTGCTCGGCCAGACGCGCGAA ACGCTGATCGGCCATCCCTACTACGAACTGCTCGGCGAAGACGACCTGGCGCGTGCCCGCCAACCCTTCCAGCGCGCCATGCAGAGCGGCGCAGGCAAGA CCTTCGCCATCCCCCTGCAGCGCGCCGACGGCAGCCTCGGCTACTTCGAGGCCACGGTTTCGCTGATCCACGACCTGCAGGGCGAACTACGGGGCTACCG CGGCATCGTCCGCGACGTCAGCGACCAGATCGCCTACCAGCAGCAATTGCTGGAAATGGCCTACCGCGACCCGCTGACCGGCCTGGGCAACCGCAAGGCC TTCGACGAACAGCTCGGCCAGGCGTTGCTTCGCGCCGGCTCCGGCGGAAGCGAACTGGCGCTGCTGTACCTGGACCTGGACCGCTTCAAGGAGGTCAACG ACCGCTTCGGCCACGACATCGGCGATGCCCTCCTCAGGACCGTCGCCGAACGGGTACGCAGCACCCTGCGGCAGCCGGACAAGGCCTACCGCCTGGGCGG CGACGAATTCGCCGTGCTCCTCGAGGACAGCCAGGAAAACAATCCGCAGCGCCTCGCAGAACGCCTGCTGGCGGCGCTGGTCCAACCGATCGCGCTGAAT GGCGAACGCATCGACTTCGTCACCCCGAGCATCGGCATCGCTCTCTACCCGCGGCATGCCGGCGATGCCGAAGGACTGGTCCGTGCCGCCGACAGCGCCA TGTACGAGGCCAAGCGCCAGCGCAACCACTATTGCCTGTACCAGGCGCCAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATGCGCGGTCAAACAGGCTCTGTCGCGGGCTTTCGCCAGTCTGCTAAGGTTTCAGCCCGCATCCCATCGGAGAACCATTCCCTATGCCAGCCCTGAGCG GCCCGCAATACCTCGGCGAAGGCCTGAAGCTGATCATGCGTCCCGGCCTGCGCCTGTTCGTGCTGATCCCCCTGACCCTCAACCTGCTGGTGTTCGCCCT GCTGATCGGCTTCGCGATGCAGCAGTTCAGCCACTGGGTCGACCTGCTGATGCCCAGCCTGCCCGACTGGCTGAGCTTCCTGCAGTACATCGTCTGGCCG TTGTTCGTCCTGCTGGTGCTGGTGATCGTGTTCTTCACCTTCACCATGGTCGCCAACATCATCTCCGCGCCGTTCAACGGCTTCCTCTCGGAAAAGGTCG AGGTGGTGGTTCGCGGCCGCGACGACTTCCCGCCGTTCAGCTGGGCCGAACTGCTGGCGATGATCCCGCGCACCATGGGTCGCGAGATGCGCAAGCTCGC
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| Amino Acid Sequence |
>diguanylate cyclase
MPLRTRLLWLFLPLLAASLGGIWLLSESILLSRFDREDQQRLQEGATVLHNRLDFELKRHLDIVRTYAWWDASYDFIQRPNETFEQENLDHEMLDDLGFD FVLFLDDRGHLQLKQWSPPAPDQRVLFGAPSASDQALLEALQQRAIRLGALDFRGRTDHSLSELLLVDNLPTLLVSVPISNNQGSAPAKGAILAGYFLDR ERLANLREQMQADLQPMPNIATDSTWKPLRSRSGSTHNQALLSPRRFIGEHVQQVSVQYLSSSGEPQLRFDITKKRLLYIQGEKAINFFLGASLLVALGA FLVGYLALELWVLRRVQRLNREVAEVGRNAHSIRLSDFGNDELGQLAGEMNQMLERLEHSEARDRAILQSMRDGYFEMDVDGVILTVNPALYQLLGQTRE TLIGHPYYELLGEDDLARARQPFQRAMQSGAGKTFAIPLQRADGSLGYFEATVSLIHDLQGELRGYRGIVRDVSDQIAYQQQLLEMAYRDPLTGLGNRKA FDEQLGQALLRAGSGGSELALLYLDLDRFKEVNDRFGHDIGDALLRTVAERVRSTLRQPDKAYRLGGDEFAVLLEDSQENNPQRLAERLLAALVQPIALN GERIDFVTPSIGIALYPRHAGDAEGLVRAADSAMYEAKRQRNHYCLYQAPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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